Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0634 ATGGACGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGCATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTACGTTCTCGTCACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCTTTCGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAAGTTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTCACTTCTCCTACCTTTGCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACCCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTTGTAATGGTGGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAAAGCACCATGGTTGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTGGTTGAAGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1299 41.34 MDGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKVSFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFACAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVVMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20021859 20025801 + ClG42_04g0063400.10 Clacu04g0634 247031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0634 432 MobiDBLite consensus disorder prediction 380 409 - -
Clacu04g0634 432 MobiDBLite consensus disorder prediction 388 409 - -
Clacu04g0634 432 PANTHER WAT1-RELATED PROTEIN 19 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Clacu04g0634 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Clacu04g0634 432 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Clacu04g0634 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1517 Clacu-Chr2:28630346 Clacu04g0634 Clacu-Chr4:20021859 1.00E-70 dispersed
Clacu04g0634 Clacu-Chr4:20021859 Clacu10g1627 Clacu-Chr10:29624319 6.40E-125 dispersed
Clacu04g0634 Clacu-Chr4:20021859 Clacu11g1749 Clacu-Chr11:28669297 6.00E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0634 - - - 0.0