Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0814 ATGGCAGAAAAATTGGAGGTGTTTGGTTTCTGGCCAAGTCCATTTAGTCTGAGAGTGGAGTTGGCTCTCAAACTCAAAGGCATCCAATACCAATACTTTGAGGAAGATGTGCTGAACAATAAGAGCGATTTGCTGCTGAAATACAACCCAACCTACAAGAAGATTCCTGTTTTAGTCCACCATGGAAAACCCATTTCAGAGTCTCTTGTAATTCTCGAATACATTGAAGAAAACTGGAAACACAGCCCTATCTTGCCTCATGATCCTCATCAAAGAGCTCTTGCTAGGTTTTGGGCTAAGTATATCGATGGCAAGGTTGTGTCTACGATAGGGAAAGCTCCTGGAAGCAAAGGAGAAGAGATAGAGAAGGCTGTAGAAGAAGTGAAGGAGGCATTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAGTTTTTTGGGGGAGAAACAATTGGGTTTGTGGACATTGTAGGTATCCTCATAGCCTTTTGGTTTCCTGCCATTGAAGAAGCATTAGGGATTGAGCTGCTAACAACCCACAAATTTCCAAACCTAATACAATGGACTCAAGAGCTTGCCAACCACACTGTGGTGAAGGAGCTTCTCCCTAAAAAGGATAAGCTTGTTGCCCATTTGAAAACTGTTCATGGGAAAAACTAG 657 42.47 MAEKLEVFGFWPSPFSLRVELALKLKGIQYQYFEEDVLNNKSDLLLKYNPTYKKIPVLVHHGKPISESLVILEYIEENWKHSPILPHDPHQRALARFWAKYIDGKVVSTIGKAPGSKGEEIEKAVEEVKEALEPLEKELKSNKFFGGETIGFVDIVGILIAFWFPAIEEALGIELLTTHKFPNLIQWTQELANHTVVKELLPKKDKLVAHLKTVHGKN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22456606 22458692 - ClG42_04g0081400.10 Clacu04g0814 247211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0814 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 212 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Clacu04g0814 218 CDD GST_N_Tau 5 79 - -
Clacu04g0814 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Clacu04g0814 218 FunFam Tau class glutathione S-transferase 85 218 - -
Clacu04g0814 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Clacu04g0814 218 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Clacu04g0814 218 Gene3D Glutaredoxin 1 84 - -
Clacu04g0814 218 Gene3D - 85 218 - -
Clacu04g0814 218 Coils Coil 118 138 - -
Clacu04g0814 218 Pfam Glutathione S-transferase, C-terminal domain 108 193 IPR004046 -
Clacu04g0814 218 FunFam Tau class glutathione S-transferase 1 87 - -
Clacu04g0814 218 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Clacu04g0814 218 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Clacu04g0814 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Clacu04g0814 218 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Clacu04g0814 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0803 Clacu-Chr4:22370593 Clacu04g0814 Clacu-Chr4:22456606 9.20E-77 dispersed
Clacu04g0811 Clacu-Chr4:22441959 Clacu04g0814 Clacu-Chr4:22456606 4.50E-82 dispersed
Clacu04g0812 Clacu-Chr4:22446326 Clacu04g0814 Clacu-Chr4:22456606 8.30E-48 dispersed
Clacu04g0814 Clacu-Chr4:22456606 Clacu05g0286 Clacu-Chr5:2474634 3.70E-57 dispersed
Clacu04g0813 Clacu-Chr4:22451812 Clacu04g0814 Clacu-Chr4:22456606 8.40E-42 tandem
Clacu04g0814 Clacu-Chr4:22456606 Clacu04g0815 Clacu-Chr4:22463109 5.80E-66 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0814 K00799 - csv:105434443 350.517