Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0865 ATGGGTAGACTAGCTGTAGCCGCTATCGTGAGTTTATGGGTGGTTCCGATCTCCATCCTCGTCAACCGCATTCTTCCTGATCCTTATATGGACGAGATATTTCATGTGCCTCAAGCTCAGAAGTACTGCAGTGGGAACTTCAGAAGTTGGGACCCCATGATTACAACTCCTCCTGGACTGTACTATCTTTCACTTGTCCATGTTGCTTCTTTGTTTCCAGCCATTGTCTTTACTCGAGCAGCACAATCATTTTCTGTAGCCTGTTCCATTCAGGTTCTTCGTTCTATCAATGGGATTTTGGCAGTTTTGTGCAGTGTACTTGTATATGAGATAATCTCCCATTTAAGGCCAAATCTTGATGATAAAAAGGCAACGATTTATGCTGTGATTTTAGCACTTTATCCACTCCATTGGTTCTTCACTTTTCTGTATTACACTGATGTTGCATCGCTTACAGCCGTCCTTGCTATGTACCTAGCATGCTTGAAGAAGAATTACTGGTTGAGTGCATTGTTTGGTATCTTTGCAGTTGTCATTCGACAAACAAATGTTATATGGATGCTATTTGTAGCATGCTCTGGGATTATTGATACTACTCTGACTTGCCACGTTGATAATATACAAATGCATGAGAATGATGTAATGGAGGAAAGTAATCCATTGAATGCTAAAGGCAATTTCGCTTCTAGAGCAAACTTGCGAAAGAGAAAGTTGAATCGTACAAAGGATATGGTTAAACAATTTCCACAGAGCACAAGATTCTCATCAATAAACCAGAAACTAGCTTTAATGGACGAGATTAGGACCATGACATTGACCATGTGGCATATGAAATTTAAGCTCTTGGTTTCATTTTGCCCCTTTGCGATTGTGCTTATGGCATTTGTTGCTTTTGTTCGTTGGAATGGAAGTATAGTTCTTGGTGCAAAGGAAGCACATGCAGTCTCTCTGCATTTTGCCCAGATTATGTATTTTGGTCTTTTCTCTGGTTTTATTATGGCTCCAGTGCACTGTAATCTAAGTCAAGTCATAGATTTGTTTCACTCATTCTGGAAAGGCAGGCCTCTTAGTTTTTTTCAAGTTTGCGTTGCTCTTCTTGCTGGCTTCATCTCTGTACACTATTTCAGCATAGCTCACCCCTATCTGCTAGCTGACAATCGGCATTACCCATTCTACCTCTGGCGTAAAGTTATCAACGCGCATTGGTCATCGAAGTACCTTCTCGTTCCAGCATATATTTGTTCATGGCTTTCCATCATCAACATATTAGGGAAATCTCAGAGGAAAATCTGGGTACTTGCCTATTTCTTAGCCACTGCTGCGGTTCTTGTTCCTGCTCCTTTGATCGAGTTTAGATACTTCACAACTCCAATTTACTTCTTGATGCTTCATTCTCAGATGAATGGTAGACTAAGTAGGCTCTTGGTTGCACTTCTTTACATAGCTTTGAATGCCTTCACAATGTTCATGTTCTTGTTTCGTCCATTTTATTGGGAAAATGAAACTGGAAAGCAGAGGATTCTGTCGTGGAATTACAGTCTAACAGGTTTGCTAGTAGAAATCAGTTGGTTTAGATTTGTTAAGTTATCACTCCAATTATATCAAATTTCTCTGTCTTCGAGCTCAATTTGCTTCTCCGATTCTGAATTATCGACCCCTTTTGACCTTCAAATGGCGATCTCCGGCTTTCGAGCTCTTCTATGGTGGAGCAACAGATGGTCCAAGAAAGACTGGGCGATTGCAGCTATCTGTTTCGCTTTCATTGTTTTCGTTTTTTCCTTCCTCTCCGATTCTTGGCATGCTGAAGATAGTGGCATCAACCATAGTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTATCTTTGCTTCAGAATGCCAAAGCAAAAGGCGCTCTATGTCTTGATGGGAGTCTGCCTGGATACCATTTTCAGAAAGGCTTTGGATCTGGTTCTACCAGCTGGGTTCTTCATATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCTTGTTCTTCGCGGAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAAGGTGAAACAAAGAATGGAGATGTACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCACTTATGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCTAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTACCGAAGGATGCAACTGTCAAGTGTCTGGCTGATGGTGGATTTTTCCTTGACGAGGAAGATGTTTGGGGAAATCGTACAATGAGATCTTTCTATCGTGATGTTTTCAACCTTCAGAGAACTGGTAAAAGCTTACCCAAGGATTGTACAGCTACAGACGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATACACACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGGTGCCAAACACATTAGATCCTGCTGGCTCTTGGCAAAAATGTAGGCTTAATATTCATAAATGTGACCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGCGCTGAGTGACTTCAAGCACAACAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTGGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTATCCAAGCCGTTGATGTTATTAGATTCTTACGTGCTCCGAGTCAGCCATAA 3009 41.91 MGRLAVAAIVSLWVVPISILVNRILPDPYMDEIFHVPQAQKYCSGNFRSWDPMITTPPGLYYLSLVHVASLFPAIVFTRAAQSFSVACSIQVLRSINGILAVLCSVLVYEIISHLRPNLDDKKATIYAVILALYPLHWFFTFLYYTDVASLTAVLAMYLACLKKNYWLSALFGIFAVVIRQTNVIWMLFVACSGIIDTTLTCHVDNIQMHENDVMEESNPLNAKGNFASRANLRKRKLNRTKDMVKQFPQSTRFSSINQKLALMDEIRTMTLTMWHMKFKLLVSFCPFAIVLMAFVAFVRWNGSIVLGAKEAHAVSLHFAQIMYFGLFSGFIMAPVHCNLSQVIDLFHSFWKGRPLSFFQVCVALLAGFISVHYFSIAHPYLLADNRHYPFYLWRKVINAHWSSKYLLVPAYICSWLSIINILGKSQRKIWVLAYFLATAAVLVPAPLIEFRYFTTPIYFLMLHSQMNGRLSRLLVALLYIALNAFTMFMFLFRPFYWENETGKQRILSWNYSLTGLLVEISWFRFVKLSLQLYQISLSSSSICFSDSELSTPFDLQMAISGFRALLWWSNRWSKKDWAIAAICFAFIVFVFSFLSDSWHAEDSGINHSFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSTSWVLHIEGGGWCDTVSSCSSRKMTPLGSSDYMERRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGDVLYFRGQLIWEALMDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADGGFFLDEEDVWGNRTMRSFYRDVFNLQRTGKSLPKDCTATDEPSKCLFPQEIIKHIHTPLFLVNPAYDFWQIQHVLVPNTLDPAGSWQKCRLNIHKCDHAQLEILQGFRDSLLKALSDFKHNKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFIQAVDVIRFLRAPSQP 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23001627 23017721 - ClG42_04g0086500.10 Clacu04g0865 247262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0865 1002 PANTHER ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10 1 508 IPR016900 GO:0005783(PANTHER)|GO:0006487(PANTHER)|GO:0006488(InterPro)|GO:0106073(PANTHER)|GO:0106073(InterPro)
Clacu04g0865 1002 Pfam DIE2/ALG10 family 26 462 IPR016900 GO:0006488(InterPro)|GO:0106073(InterPro)
Clacu04g0865 1002 Pfam Pectinacetylesterase 618 967 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1829 Clacu-Chr3:32077883 Clacu04g0865 Clacu-Chr4:23001627 3.20E-116 dispersed
Clacu04g0865 Clacu-Chr4:23001627 Clacu05g0962 Clacu-Chr5:8482553 8.10E-115 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0865 K03850 - csv:101214003 913.679