Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0934 ATGGTCAAGTCATGTGATGCATCTCTTTTATTAGAGATGAAAAAGGAAGAAGGTGTATCAGAAATGAAGTCTTCAAGAAGCTTTGGGATAAGAAATCTCAAATATGTTAATAAAATTAAACAAGTCCTTGAAAATGAATGCCCTAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCTATTGTTTTGTTGGGGGGATTAGAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGCTATGGAGAAATAGTGGAAGAAATGATTCCAAATCATAATGACTCTCTTTCATTGGTTCTTTCTCGATTTCAAGATATTGGCATTGATCCTCAAGCTACTGTTGCTCTTTTAGGAGCCCACTCGGTGGGTCGAGTCCATTGTGTAAACATAGTGAACCGTCTCTACCCGACCGTGGACCCGACTTTGGATCCAGATCACGCAGAATATTTAAAAGAAAGGTGCCCAAACCCGAACCCGGATCCGAAGGCAGTCCAATACGCGAGAAATGATTTGGAAACTCCGATGGTGTTGGACAACAATTTCTACAAAAACGTATTGGGGCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAGGCCCAATAACTCTTCCTTATGTCCAACAAATGACCTCCAATAACACTTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAACAACCCTCTCACTGGTGAAGAAGGAGAGATTAGAATGGATTGTCGACGTGTCAACAATTGA 771 41.63 MVKSCDASLLLEMKKEEGVSEMKSSRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLLGGLEMEMKTGRRDSKESYGEIVEEMIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAEYLKERCPNPNPDPKAVQYARNDLETPMVLDNNFYKNVLGHKALLLVDQQLGSGPITLPYVQQMTSNNTYFLAQFARALLLLSENNPLTGEEGEIRMDCRRVNN 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23596353 23597997 - ClG42_04g0093400.10 Clacu04g0934 247331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0934 256 PANTHER - 1 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 189 206 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 31 44 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 69 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 50 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 116 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Plant peroxidase signature 229 242 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 Pfam Peroxidase 2 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 Gene3D - 1 255 - -
Clacu04g0934 256 SUPERFAMILY Heme-dependent peroxidases 2 255 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 FunFam Peroxidase 95 234 - -
Clacu04g0934 256 PRINTS Haem peroxidase superfamily signature 117 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Haem peroxidase superfamily signature 69 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 PRINTS Haem peroxidase superfamily signature 51 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 ProSiteProfiles Plant heme peroxidase family profile. 1 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu04g0934 256 Gene3D Peroxidase, domain 2 95 234 - -
Clacu04g0934 256 CDD secretory_peroxidase 2 254 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0466 Clacu-Chr3:5022160 Clacu04g0934 Clacu-Chr4:23596353 1.50E-81 dispersed
Clacu04g0934 Clacu-Chr4:23596353 Clacu07g0875 Clacu-Chr7:21869346 7.50E-41 dispersed
Clacu10g2013 Clacu-Chr10:33610508 Clacu04g0934 Clacu-Chr4:23596353 9.90E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0934 K00430 - csv:101221151 457.603