Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0993 ATGAGTGGCGCAAGATTCAGCATCAGAACTGGGCGAAGAAGACTGTCACAGATGACGAATTTCGCCTTCCAAGTTCTATTTGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCGGGCGCCACCTACATGTTCGCACTCTACTCCGCTGACATCAAATCCTCCTTCAATTACGATCAGACCACTCTCAACCTCATCGGCTTCTTTAAGGATCTGGGTTCCAACGTCGGAGTCTTTTCCGGCCTCATCAATGAAATTACTCCGCCTTGGGTCGTCCTATTCATCGGTGGGGTAATGAACTTCTTGGGCTATTTCATGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCAATGTGTTTGTTTATATGCCTAGGTGCCAATTCTCAGACCTTTGCTAATACAGGGGCTTTGATCCCTTCTGTGAGGAATTTCCCCCGGAATCGAGGTAATGTATTGGGTTTATTAAAAGGGTTTGTTGGGTTAAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGGAATGATTCTAAGGATTTTATCTTCCTTATTGCTTGGTTGCCTACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTTAAATCCAATGATCTAAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGATTTTGATTATTGTTCAAAACGAGATCATGTTTACTAGAATTCAGTATTTGGGTTGTGCGTTTGTTCTCCTAGCGTTTCTTTTTCTTCCACTTGTCGTTGTTATAAGAGAAGAATTCGCCATTAGGAAGAGGAAATTGCAAGGTGTGGATGTAACTTCTTGGCTTCCAGTTCCAACAGACCCATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTGTGCCGACGACTGCCATAGCTTTAGCCAACCCAAGTTCTTGCTTTGAAAACGTGTTCAAACCGCCAGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTGTTGCTACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGATGAAGTATAACTTCTCTCGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGCGTTGGTCATCTTCTAATTGCCTCTGGAGTCCCAACCTCCCTTTATTTTGCTTCAGTTATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATACTATGCAACTTTATATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGCAGCCGTTGGTCGTAGAAGTGTAGCTGGTAGAGACTTAGATTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTCATAATATCTGCTGCAACCGTGTTCGGTTGTGTTGTTTCATTCATTTTGGTCCTTCGAACTTGGAAATTCTATAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAAGAAAGGAAGCAGAATGA 1740 42.82 MSGARFSIRTGRRRLSQMTNFAFQVLFGRWFTVFASLLIMSVSGATYMFALYSADIKSSFNYDQTTLNLIGFFKDLGSNVGVFSGLINEITPPWVVLFIGGVMNFLGYFMIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVRNFPRNRGNVLGLLKGFVGLSGAILTQIYHAFYGNDSKDFIFLIAWLPTAVSFLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIVQNEIMFTRIQYLGCAFVLLAFLFLPLVVVIREEFAIRKRKLQGVDVTSWLPVPTDPSPAELPLPRPSSVPTTAIALANPSSCFENVFKPPERGEDYTILQAIFSVDMLILFVATICGAGGTLTAMDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRAFSGYASEFLWMKYNFSRPLFLTLVLLLSCVGHLLIASGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMAAVGRRSVAGRDLDCKGVHCYRLAFLIISAATVFGCVVSFILVLRTWKFYKGDIYKKFREERKEAE 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24096053 24097792 - ClG42_04g0099300.10 Clacu04g0993 247390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0993 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 572 - GO:0016020(PANTHER)
Clacu04g0993 579 Pfam Major Facilitator Superfamily 357 557 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu04g0993 579 SUPERFAMILY MFS general substrate transporter 226 561 IPR036259 -
Clacu04g0993 579 Pfam Nodulin-like 29 276 IPR010658 -
Clacu04g0993 579 CDD MFS_Mch1p_like 28 549 - -
Clacu04g0993 579 Gene3D MFS general substrate transporter like domains 329 562 IPR036259 -
Clacu04g0993 579 SUPERFAMILY MFS general substrate transporter 30 245 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0993 Clacu-Chr4:24096053 Clacu10g1976 Clacu-Chr10:33278980 1.40E-196 dispersed
Clacu10g1973 Clacu-Chr10:33252910 Clacu04g0993 Clacu-Chr4:24096053 2.80E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0993 - - - 0.0