Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g1245 AAGAACTCGTTGAGACGAGGTCCATTGTTAGGAGAACCTCGTCTCTCCCCACAAGGGTTGATGAATGTGACACAAATAGAAGGATGTCGCGGAGACAGGATTTGCATCTGTAACCTTAAGCACATCGGCTATCATGCTGGAACTTCAAGCTATTGGGATGGGAAAGAAAGGCAAAGCGCTTCTTTGAGAACGCTTTTTCAGAGGAACGGCGAGAATGGGGTCAAAAACACGCCTGGGATGTGGGAGCTGAGTCGCGCCAACACTTGGAGGAATGAGATAAGCTCCCATTCACGAGGCCCAGAAGGTTTAATAGAATCAGAATGCGCGGGTGCCCTTCAGAACTACCTTGGAAAGCGCAGTCGTGAACCAATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACGCGTCTGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATAGCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTTTACCAATACCGTCACTCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCCCTCGGATGGTTCCACAATCGGTTCTACGTACAACAATGTGTTGAACTACTTCAACAAGTCTGCGTATATTATCGAAAAAGATCTGAGCGAGTGCTTTTCTTAAGCAAAAATGCTAATTGTGCTATTGCGTTCCATTACAAAGTCTTTCGACACCCTCCAATGCTTCAGATTCCGCGACTGACCAGCTCCCTCAGGGAGCCATTCGATGTCGACCAGGCGTATCTCCATCGCAAGCTCCTTCTTCAAAATCACAAACCGTCCCACTCCATAGCTTCATTGGGCGAGTCAGAACTAGCGCGGAAGATAGTGTATCAATGGGATGAAGCATCTTTTGAAGTTCGACAAGCCTATAAGCATTTCATTGCGGGAGTTGTTGGGTTGGTGGACAGAGAAGTACCATCCGAGGAGCTTGGTGAGGTAGCACTGACTATTTATTGCCTTTTTGGCGAGCAAAAAGAAGAGAATGATCTCGACTATATTGCTAAAAACATGGAAGAATTGCAAAAGCTTATTGGCAATACAGTTTCAGATGCTAGGCTGCAGAAAGTTATTTCTCTAGCTCAGAAACTATTTATTTTGCAGCCAAGGGATCACGCAACTGCATTGCTAGCAGAGAAGCATGTTAACAAGGGTGACTCCTCTGTAGAGTTTGGCGCTGATCTTGCTTTTAGAGAACCTACTAGGTTTATGGTGGATGCGTCTCTGGAAAATTCAGATTTACTGGGCAAGGATATTGCTGCACCTACATTTTATGACAGACAACATGTGCAAGACCATTCCATGAACTTTGATCTCTCTAATGAAAGAGGAAAGTTAAATTTGAGTTGGTTGAGGGATGCATGTGACGAGATAACAAGAAAAAGTACCTCACAACTCTCCCTTGATGAGCTTGCAATGGCCATTTGCCGAGTCCTTCATTCAGAAAAACCTGGCGAGGAGATAGCTGCAGATCTATTGGATCTTGTTGGTGATGGAGCATTTGAGTTTGTTCAAGATCTTATTTCACACCGAAGGGAACTTGTTGATGATATTCATCATGGGTTAACAATAATAAAATCTGAAAAACCAAATTCAAGCTCACAATCACGAATGCCTAGCTATGGAACTCAGGTTACTGTTCAAACAGAATCAGAGAAACAAATTGATAAGCTTCGACGTAAGGAGGAAAAGAGAAATAAACGAGGAATTGAATATGATTCTGAAAGTGATTTCTCTGCTGTAAGCTTTTCTTCTCTAGTTCAAGCAAGCCAAAGGAAAAGTCCATTTGAAGATCTTATTGGTTCTGGTGAGGGCTCTAACTCCCTTACAGTTAATGCACTTCCTCAAGGAACACAAAGGAAGCATTTTAAGGGATATGAGGAGGTAATTATCCCTCCAATCCCAGCAGCACAAATGAAACCTGGTGAAAAGCTGATTGAAATAAAGGAGTTGGATGATTTTGCTCAAGCTGCTTTTCGTGGATTTAAATACTTAAACCGCATACAGAGTCGCATTTTTGACACTGTTTATAACACCAATGAGAATATACTAGTCTGTGCTCCAACAGGGGCTGGGAAAACTAATATAGCGATGATCTCCATTCTCCACGAGATTTCACAGCACTTCAAGGATGGATATTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCTATGAAGGCATTGGCTGCAGAGGTCACATCTACTTTTAGCCATCGTTTATCACCCTTGAATGTTACTGTAAGAGAACTAACTGGAGACATGCAACTTTCAAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACTAGAAAAAGCAGTGACATGTCACTCTCAATGTTAGTCAAACTCTTAATTATTGACGAGGTGCATCTTCTAAATGATGACCGAGGGCCTGTAATTGAGGCATTAGTTGCACGAACTCTTCGTCAGGTGGAGTCAACACAAACAATGATACGGATTGTTGGCCTTTCAGCCACCCTCCCTAATTACTTAGAGGTTGCACAGTTTCTTAGAGTGAATCCAGGAACAGGACTTTTCTTCTTTGATTCTAGCTACCGTCCTGTGCCTCTTGCACAACAATATATTGGTATCAGCGAGCATAACTTTGCAGCTCGCAATGAATTGTTAAATGAAATATGCTATAAGAAGGTTGTTGATTCATTAAAGCATGGGCATCAAGCAATGGTGTTTGTTCATTCTCGAAAGGACACAGCAAAGACAGCAGAGAAACTGGTCGAAATTGGTCGGAAGTATGATGATCTTGAGGTATTTAAGAATGATGCACACCCGCAATTTGGTATTATCAAGAAAGAAGTCATCAAATCCAGGAATAAAGATCTAGTAGAACTTTTTAATTTTGGGATTGGTGTACATCATGCTGGAATGCTACGTTCTGATAGAGGTTTAACCGAAAGACTTTTCTCTGATGGACTGTTGAAGGTTCTTGTTTGTACAGCCACCTTAGCATGGGGTGTAAATCTGCCTGCTCATACGGTTGTTATAAAGGGCACCCAATTATATGATCCAAAAGCTGGTGGATGGCGAGATTTGGGTATGCTTGATGTCATGCAGATTTTTGGACGAGCTGGGAGACCTCAGTTTGACAAAAGTGGTGAAGGCATCATAATTACATCTCACGATAAACTTGCCCATTATTTGCGATTGCTTACAAGTCAGCTCCCTATAGAGAGTCAGTTTATTGGTTCTTTGAAAGATAATTTGAATGCGGAGGTTGCACTGGGTACTGTAACGAATGTGAAGGAAGCTTGTGCCTGGCTTGGATATACATATCTATTTATAAGGATGAGACTAAATCCGCTGGCATATGGCATTGGATGGGATGAGGTCATGGCCGATCCATCTTTGAGTTCAAAGCAAAGAGCTCTCATAACAGATGCTGCACGTGCACTTGACAAATCAAAGATGATGCGTTTTGATGAAAAAAGTGGCAACTTTTATTGTACAGAGCTCGGCCGCATTGCCAGCCACTTCTATATTCAGTATTCCAGTGTTGAAACATATAATGAGATGTTGAGACGTCATATGAATGACAGTGAGATTATTGACATGGTCGCTCATTCTTCTGAGTTTGAAAATATTGTTGTTCGAGATGAGGAGCAGAGTGAGCTGGAGATGTCAGTACGAACATCATGTCCCTTGGAAGTTAAAGGTGGCCCATCCAATAAACATGGAAAAATTTCCATTCTTATTCAGTTGTACATTTCCAGAGGTTCCATCGATACCTTCTCATTAGTCTCCGATGCTGCTTATATAAGTGCTAGCTTGGCTCGTATTATGCGAGCTCTATTTGAAATATGTTTGAGAAGGGGTTGGTGCGAAATGACTTTGTTCATGTTGGAATACTGCAAAGCTGTTGATCGTCGAATATGGCCACACCAGCATCCTCTAAGACAATTTGACAAGGATCTTTCTTCAGATATATTGCGCAAGCTTGAGGAGCGAGAGGCTGATTTGGATCGTCTACAGGAGATGCAGGAAAAAGACATAGGAGCATTGATCCGTTATGCACCTGGTGGAAGATTGGTTAAGCAGTATTTAGGATATTTTCCACTAATCCAGTTATCAGCAACTGTCAGCCCAATAACAAGAACAGTCCTAAAGGTTGAGGTGGTCATAACAGCCGACTTCATATGGAAAGATCGTTTTCATGGAGGTTCACAACGCTGGTGGATACTAGTTGAGGATAACGAGAATGACCATATTTATCACTCCGAGCTTTTCACTCTGGCAAAGAAGAAGGCTAGAGAGCCTCAAAGGCTTTCCTTCACAGTCCCAATATTTGAGCCACATCCTCCTCAATATTATATTCATGCCGTTTCTGACTCCTGGCTGCAAGCAGAAGCATTTTACACCATATCTTTCCAAAATTTAGCACTGCCGGAGGCCCGTACGTCGCACACTGAGCTCCTAGACTTGAAACCTCTTCCAATAACTGCTCTTGGTAACAGAAGTTACGAATCCCTGTATAAATTTTCACATTTTAATCCAATACAAACACAGATTTTTCATGTGTTGTATCATACAGATGATAACATTCTGTTGGGTGCTCCCACTGGGAGTGGAAAAACCATATCTGCTGAACTTGCTATGCTTCGTCTCTTCAATACTCAGCCTGATATGAAGGTTGTCTACATAGCACCTTTGAAGGCCATTGTTCGTGAAAGAATGAATGACTGGAAAAATTGTCTTGTTTCTCGGCTCGGCAAAAAAATGGTTGAAATGACGGGAGATTATACCCCTGATTTGATGGCACTTTTGTCAGCAGATATTATAATATCAACCCCCGAAAAGTGGGATGGTATTAGTAGAAATTGGCATAGTCGAAGCTATGTTACAAAGGTTGGACTAATGATTCTGGATGAGATCCATTTATTGGGAGCAGATCGTGGTCCCATTCTTGAGGTTATTGTTTCAAGGATGAGGTATATATCATCACAGACCGAGCGAAAAGTTAGATTTGTAGGCCTTTCAACTGCTTTAGCGAATGCAAGTGATTTGGGTGACTGGCTAGGTGTTGGAGAAAATGGACTTTTCAATTTCAAACCAAGTGTAAGGCCAGTGCCTCTTGAAGTTCATATTCAGGGATATCCTGGAAAGTTCTACTGCCCTAGGATGAACAGTATGAATAAACCAACTTATGCTGCCATCTGCACCCATTCACCAACCAAGCCAGTTCTTATATTCGTCTCATCTCGTCGCCAGACAAGACTCACGGCATTGGATCTTATTCAGTTTGCAGCTTCAGATGAGCATCCAAGGCAATTTCTTAATATGGCCGAAGACGAGCTTCAGATGATCCTTTGTCAAGTCATTGATCAAAATCTCAGGCACACTTTGCAGTTTGGTATCGGGCTACACCATGCAGGTCTAAATGATGGGGACAGGTCTATGGTTGAGGAACTGTTTGCAAACAACAAAATTCAGGTATTGGTTTGTACTAGCACATTGGCTTGGGGTGTGAACCTTCCTGCACATCTAGTTATTATCAAGGGAACAGAATATTATGATGGAAAATCAAAGAGATACGTTGATTTTCCAATCACAGATATTCTGCAAATGATGGGTCGTGCAGGACGACCACAGTATGATCAACATGGAAAAGCAGTTATTCTTGTTCATGAACCCAAAAAGAGCTTTTATAAGAAGTTTTTGTACGAACCATTCCCAGTTGAGAGTAGTCTGAAGGAGCAGTTGCATGACCATATCAATGCTGAGATAGTTTCGGGCACCATTTGTCATAAAGAGGATGCAGTACACTATCTTAGCTGGACATATTTGTTTCGTAGGCTGATGGTAAATCCTGCTTACTATGGGTTGGATAGCATGGAACCTGAAATTCTAAGTTCGTACTTATCTAGGTTAGTACAAAGCACATTTGAGGATCTCGAGGATAGTGGATGCATAAAGATGGATGAAGACAGAGTGGAGCCAATGATGCTGGGTTCAATAGCATCTCAGTATTACCTCAGCTACATTACTTTATCAATGTTTGGCTCAAATATAGGTCCAGATACGTCAGTTGAAGTATTTTTGCATATCCTTTCCGCCGCTTCTGAATATGATGAACTTCCTGTGCGGCATAATGAGGAAAATTACAATGCTGCTCTATCTGAGAGGGTTCGATATAAGGTGGACAAAGATCGACTTGATGATCCACATGTGAAGGCAAATTTACTTTTTCAGGCACACTTTTCTCAGTTGGAATTACCAATCAGTGACTACATTACCGACTTAAAGTCAGTGTTGGATCAGAGTATACGCATTATTCAGGCCATGATTGATATATGTGCCAATAGTGGATGGCTATCAAGCTCGATTACATGCATGCGTCTATTGCAAATGGTCATGCAGGGCTTGTGGTTTGATGTGGATTCAGCATTATGGATGCTACCATGCATGAATGATGACCTTGCAAATTCACTTAAAAAATCGGGATATCTAACTCTGCAGCAACTGTTGAATCTTCCCAAGACAGCTTTGCATAATTTGATTGGAAATTTTCCTGCTTCAAAATTAACTCAGGATTTGCAGATGTTTCCTCGTGTCCAAATGAAGATAAAACTTCAAAGGAAGGACGACGACGATGGAAAAGATCCCTCTCTTAACATTAGATTGGAGAAGATAAGTTCGAGGAAAAACAGAACCAGGGCATATGCACCACGGTTTCCCAAGATGAAAGATGAAGCATGGTGGCTTGTACTTGGTAACACCTCTACGTCGGAACTGTATGCTTTAAAGAGAGTTTCTTTCGCTGATCGCTTGGTCACAACCATGCAGTTGCCTCCAAAAAGAAATGACTTCCAGGAAATGAAATTGATTTTGGTCTCAGATTGTTATCTTGGTTATGAGCAAGAATACTCCATTAATATGTCGCCAGCCTTTAAAATCGTTGAAACTAATCACTTTCCTGGAAAAGTAACGAGCTTGGCCCACATTGATAATGCTAACAAGATTGTGAAGGAGAAACCCACCTCACGACAACTTGAGATGTTGAGGAGAACAGTTTTTGGGCAATTTGTTGATATGGATGTTGAAGCACCGAAGCAAAGACGAGAAAAAGTGTCACTGCACAAACAGATTATAACTGGAGGGCCCACATAG 7470 41.82 KNSLRRGPLLGEPRLSPQGLMNVTQIEGCRGDRICICNLKHIGYHAGTSSYWDGKERQSASLRTLFQRNGENGVKNTPGMWELSRANTWRNEISSHSRGPEGLIESECAGALQNYLGKRSREPMPRTAKTENSVTRLIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFIAIYYAPLHLALGRPHTITVLALPIPSLIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPLGWFHNRFYVQQCVELLQQVCVYYRKRSERVLFLSKNANCAIAFHYKVFRHPPMLQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPSHSIASLGESELARKIVYQWDEASFEVRQAYKHFIAGVVGLVDREVPSEELGEVALTIYCLFGEQKEENDLDYIAKNMEELQKLIGNTVSDARLQKVISLAQKLFILQPRDHATALLAEKHVNKGDSSVEFGADLAFREPTRFMVDASLENSDLLGKDIAAPTFYDRQHVQDHSMNFDLSNERGKLNLSWLRDACDEITRKSTSQLSLDELAMAICRVLHSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVDDIHHGLTIIKSEKPNSSSQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNKRGIEYDSESDFSAVSFSSLVQASQRKSPFEDLIGSGEGSNSLTVNALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLIEIKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLEVFKNDAHPQFGIIKKEVIKSRNKDLVELFNFGIGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLLTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRIWPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGYFPLIQLSATVSPITRTVLKVEVVITADFIWKDRFHGGSQRWWILVEDNENDHIYHSELFTLAKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEARTSHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHTDDNILLGAPTGSGKTISAELAMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMAEDELQMILCQVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSSYLSRLVQSTFEDLEDSGCIKMDEDRVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSVEVFLHILSAASEYDELPVRHNEENYNAALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWMLPCMNDDLANSLKKSGYLTLQQLLNLPKTALHNLIGNFPASKLTQDLQMFPRVQMKIKLQRKDDDDGKDPSLNIRLEKISSRKNRTRAYAPRFPKMKDEAWWLVLGNTSTSELYALKRVSFADRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSINMSPAFKIVETNHFPGKVTSLAHIDNANKIVKEKPTSRQLEMLRRTVFGQFVDMDVEAPKQRREKVSLHKQIITGGPT 2489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26550384 26593569 + ClG42_04g0124500.10 Clacu04g1245 247642

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g1245 2489 FunFam Activating signal cointegrator 1 complex subunit 3 2107 2243 - -
Clacu04g1245 2489 FunFam U5 small nuclear ribonucleoprotein helicase 970 1172 - -
Clacu04g1245 2489 SUPERFAMILY Winged helix DNA-binding domain 2012 2112 IPR036390 -
Clacu04g1245 2489 MobiDBLite consensus disorder prediction 228 274 - -
Clacu04g1245 2489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 954 IPR027417 -
Clacu04g1245 2489 SMART ultradead3 766 977 IPR014001 -
Clacu04g1245 2489 SMART ultradead3 1613 1817 IPR014001 -
Clacu04g1245 2489 CDD SF2_C_Ski2 969 1160 - -
Clacu04g1245 2489 SMART Sec63_2 1270 1577 IPR004179 -
Clacu04g1245 2489 SMART Sec63_2 2100 2413 IPR004179 -
Clacu04g1245 2489 Gene3D - 970 1172 IPR027417 -
Clacu04g1245 2489 MobiDBLite consensus disorder prediction 657 673 - -
Clacu04g1245 2489 FunFam U5 small nuclear ribonucleoprotein helicase 1414 1470 - -
Clacu04g1245 2489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1504 1801 IPR027417 -
Clacu04g1245 2489 Pfam Sec63 Brl domain 1270 1576 IPR004179 -
Clacu04g1245 2489 Gene3D - 758 969 IPR027417 -
Clacu04g1245 2489 Gene3D - 1581 1808 IPR027417 -
Clacu04g1245 2489 FunFam Activating signal cointegrator 1 complex subunit 3 1809 2013 - -
Clacu04g1245 2489 SUPERFAMILY Sec63 N-terminal domain-like 1298 1473 - -
Clacu04g1245 2489 Pfam Ycf1 217 279 IPR008896 GO:0016020(InterPro)
Clacu04g1245 2489 Pfam Ycf1 141 216 IPR008896 GO:0016020(InterPro)
Clacu04g1245 2489 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1833 2041 IPR001650 -
Clacu04g1245 2489 Gene3D - 1809 2013 IPR027417 -
Clacu04g1245 2489 SMART helicmild6 1892 1984 IPR001650 -
Clacu04g1245 2489 SMART helicmild6 1057 1149 IPR001650 -
Clacu04g1245 2489 FunFam RNA helicase, activating signal cointegrator 1 1472 1580 - -
Clacu04g1245 2489 PIRSF BRR2 339 2423 - -
Clacu04g1245 2489 FunFam RNA helicase, activating signal cointegrator 1 758 969 - -
Clacu04g1245 2489 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 996 1194 IPR001650 -
Clacu04g1245 2489 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 779 961 IPR014001 -
Clacu04g1245 2489 MobiDBLite consensus disorder prediction 247 274 - -
Clacu04g1245 2489 CDD DEXHc_ASCC3_2 1616 1804 - -
Clacu04g1245 2489 MobiDBLite consensus disorder prediction 631 673 - -
Clacu04g1245 2489 Coils Coil 1427 1451 - -
Clacu04g1245 2489 SUPERFAMILY E set domains 2287 2414 IPR014756 -
Clacu04g1245 2489 CDD DEXHc_ASCC3_1 770 965 - -
Clacu04g1245 2489 FunFam U5 small nuclear ribonucleoprotein helicase 2014 2107 - -
Clacu04g1245 2489 SUPERFAMILY Sec63 N-terminal domain-like 2133 2290 - -
Clacu04g1245 2489 Pfam DEAD/DEAH box helicase 1618 1784 IPR011545 GO:0003676(InterPro)|GO:0005524(InterPro)
Clacu04g1245 2489 FunFam U5 small nuclear ribonucleoprotein helicase 1179 1270 - -
Clacu04g1245 2489 Gene3D C2 domain 2301 2415 IPR035892 -
Clacu04g1245 2489 Gene3D C2 domain 1472 1580 IPR035892 -
Clacu04g1245 2489 Gene3D - 1179 1269 IPR036388 -
Clacu04g1245 2489 FunFam Activating signal cointegrator 1 complex subunit 1581 1808 - -
Clacu04g1245 2489 Pfam Helicase conserved C-terminal domain 1062 1148 IPR001650 -
Clacu04g1245 2489 Pfam Helicase conserved C-terminal domain 1891 1983 IPR001650 -
Clacu04g1245 2489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 964 1177 IPR027417 -
Clacu04g1245 2489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1803 2012 IPR027417 -
Clacu04g1245 2489 Gene3D - 2014 2107 IPR036388 -
Clacu04g1245 2489 SMART AAA_5 1631 1781 IPR003593 GO:0016887(InterPro)
Clacu04g1245 2489 SMART AAA_5 784 1101 IPR003593 GO:0016887(InterPro)
Clacu04g1245 2489 MobiDBLite consensus disorder prediction 631 656 - -
Clacu04g1245 2489 SUPERFAMILY Winged helix DNA-binding domain 1177 1282 IPR036390 -
Clacu04g1245 2489 FunFam U5 small nuclear ribonucleoprotein helicase 1271 1413 - -
Clacu04g1245 2489 Pfam Sec63 Brl domain 2100 2411 IPR004179 -
Clacu04g1245 2489 Gene3D - 1415 1469 - -
Clacu04g1245 2489 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1626 1801 IPR014001 -
Clacu04g1245 2489 Gene3D - 1271 1413 - -
Clacu04g1245 2489 FunFam DExH-box ATP-dependent RNA helicase DExH14 2303 2413 - -
Clacu04g1245 2489 Pfam DEAD/DEAH box helicase 771 945 IPR011545 GO:0003676(InterPro)|GO:0005524(InterPro)
Clacu04g1245 2489 CDD SF2_C_Ski2 1808 1996 - -
Clacu04g1245 2489 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 551 1515 IPR050474 -
Clacu04g1245 2489 Gene3D - 2108 2244 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g1245 K18663 - - csv:101222457 4002.59
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0965 Clacu-Chr3:13872767 Clacu04g1245 Clacu-Chr4:26550384 8.20E-36 dispersed
Clacu04g1245 Clacu-Chr4:26550384 Clacu05g0780 Clacu-Chr5:6648642 0.00E+00 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g647 . Blo16g00171 . . . Bpe13g00309 Bma06g00154 . Cmo13g01125 . . . . . . Cpe20g00069 . . . . . . . . . . . . . . . Cone2ag0807 . . . Lsi02g00115 Csa01g00593 Chy12g01505 Cme12g01949 . . Bda11g01720 . . . . . . . . Cma13g01078 . Car13g00915 . . . Bhi08g01095 . . . . . . Cla04g01159 Cam04g1218 Cec01g1729 Cco01g1775 Clacu04g1245 Cmu04g1224 Cre01g1520 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009577 1 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32