Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0167 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCGCTAAAGAGGGCCTGGTGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCTTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATCCAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATGTATTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTAGAGAGCGGCAGAATTGATTTGCTAGCAGTTGCAAGGTTTGAACCCATTCCTGGATGGTTTTTCAAGGTGATGGAGACTATTTCAGTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA 849 40.87 MASSLGGASMSQTDDFETFTPTTDVEPLKRAWCNEKAAPEILPFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLLAVARFEPIPGWFFKVMETISVAAWMLISTLDELINERNDRALKAGEPFQSDIS 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1552508 1555780 - ClG42_05g0016700.10 Clacu05g0167 247914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0167 282 MobiDBLite consensus disorder prediction 1 21 - -
Clacu05g0167 282 Pfam GINS complex protein helical bundle domain 75 138 IPR021151 -
Clacu05g0167 282 CDD GINS_B_Sld5 168 229 IPR031633 -
Clacu05g0167 282 Gene3D - 10 219 - -
Clacu05g0167 282 CDD GINS_A_Sld5 24 142 IPR038749 -
Clacu05g0167 282 MobiDBLite consensus disorder prediction 1 20 - -
Clacu05g0167 282 FunFam DNA replication complex GINS protein SLD5 9 219 - -
Clacu05g0167 282 SUPERFAMILY PriA/YqbF domain 170 229 - -
Clacu05g0167 282 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Clacu05g0167 282 PANTHER SLD5 PROTEIN 11 229 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Clacu05g0167 282 Coils Coil 49 69 - -
Clacu05g0167 282 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0167 K10735 - csv:101210888 428.713