Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g0237 | ATGGAACTTCTGTCACGCCCCATTTCAGTTGCAGTTGTATTGCTTCTGATTTCCATTGTTGTAAGGCAAATTCTAGCTGGAAAGCTGAGGAAGAAGAAGTATCATCCAATTGCAGGCACTGTATTTCACCAGCTCCTCAATTTCCACCGGTTGCAAGATTACATGACTGATCTTGCTCGAAAGCATAAAACATACAGGCTTCTTGGGCCCTTCAGGAATGAGGTTTATACTTCTGACCCACCAAATGTTGAGTATATACTCAGAACCAACTTCGAGAATTTTGGCAAGGGGTCACATAACTACAGAATTCTCAGGGATCTTCTTGGCGATGGAATTTTCACAGTTGATGGAGAGAAGTGGCGTCAGCAGAGAAAGATTTCAAGCTATGAGTTCTCTACAAAAGTTCTGAGGGACTACAGTAGTGTCATCTTCCGGAAAACTGCTGTTAAACTAGCTAACATCGTGTCCGAAGCTGCTATTTCGAATCGAATAATTGATATTCAAGATCTGTTTATGAAAACAACTCTGGATTCAATATTTCATGTTTCATTTGGAATTGATCTAGATAGCTTGCATGGATCAAATGAAGAAATGAACAAGTTTTGCTCTGCTTTTGAAGCATCAAGTACAATGACACTCTGGCGATACGTTGATGTAATCTGGCCAATCAAGAAGGCTCTGAACATTGGGTCCGAAGCTATCTTAAAAGAGAACATGAAAATTGTTGATGAGTACATATATAAGCTCATTAGTAGCGCACTCGAACAGAGAGAAAAGTTAGGCGACAATGCTTTGATGAAAAGAGAGAATATAGTGTCGAGGTTTCTGCAAGCGGAAACGTCCGATCCAAAGTATCTAAGAGATATTATTCTTAATTTTGTAATAGCTGGAAAAGACACAACGGCAGTTACCCTTGCTTGGTTCATTTACATGCTTTGCAAGCATCCTGCAGTGCAGGAAAGAGTTGCTAGAGAGATCAAGGAAGTGACAAACGTTGAAGATGTTACCAATTTTGCGGAGTTTGCTGCAAGATTGACTGAAGAATCTCTAGAGAAGATGCAGTTTCTTACTGCAGCTATCAATGAAACGCTTAGACTCTATCCTGCTGTTCCAGTGGATGCAAAGATTTGCTTTTCCGACGATACACTTCCGGATGGATTCAGTGTGAGGAAAGGAGATATGGTGTCGTACCAGCCATATGCAATGGGTAGGATGAAATTCATATGGGGTGATGATGCCGAGGAATTCCGACCAGAGAGATGGTTTGATGGAGATGGAAATCCCCAGCCTCAGAGCCCTTTCAAATTTACAGCCTTTCAGGCAGGGCCACGAATTTGTCTGGGAAAAGAGTTTGCTTACAGGCAGATAAAAATCATCTCAGCTCTATTATTGAGCTGTTTTAAATTCAAAATGAGTGATGAGAAGAAAATTGTGCAGTATCAACCAATGATCAATCTTCTCATAAAAGGAGGCCTTCAAGTTTGTGCCATTCCTAGACGTCCTATGCCCTAA | 1512 | 41.01 | MELLSRPISVAVVLLLISIVVRQILAGKLRKKKYHPIAGTVFHQLLNFHRLQDYMTDLARKHKTYRLLGPFRNEVYTSDPPNVEYILRTNFENFGKGSHNYRILRDLLGDGIFTVDGEKWRQQRKISSYEFSTKVLRDYSSVIFRKTAVKLANIVSEAAISNRIIDIQDLFMKTTLDSIFHVSFGIDLDSLHGSNEEMNKFCSAFEASSTMTLWRYVDVIWPIKKALNIGSEAILKENMKIVDEYIYKLISSALEQREKLGDNALMKRENIVSRFLQAETSDPKYLRDIILNFVIAGKDTTAVTLAWFIYMLCKHPAVQERVAREIKEVTNVEDVTNFAEFAARLTEESLEKMQFLTAAINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWFDGDGNPQPQSPFKFTAFQAGPRICLGKEFAYRQIKIISALLLSCFKFKMSDEKKIVQYQPMINLLIKGGLQVCAIPRRPMP | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2036781 | 2039876 | + | ClG42_05g0023700.10 | Clacu05g0237 | 247984 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g0237 | 503 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | Gene3D | Cytochrome P450 | 28 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | P450 superfamily signature | 446 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | PANTHER | CYTOCHROME P450 | 19 | 492 | - | - | |
| Clacu05g0237 | 503 | SUPERFAMILY | Cytochrome P450 | 33 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0237 | 503 | CDD | CYP86A | 63 | 492 | - | - | |
| Clacu05g0237 | 503 | Pfam | Cytochrome P450 | 35 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g0237 | Clacu-Chr5:2036781 | Clacu11g0946 | Clacu-Chr11:9379073 | 7.40E-109 | dispersed | |
| Clacu05g0237 | Clacu-Chr5:2036781 | Clacu05g0240 | Clacu-Chr5:2091815 | 1.80E-139 | proximal | |
| Clacu11g0418 | Clacu-Chr11:3931952 | Clacu05g0237 | Clacu-Chr5:2036781 | 3.80E-23 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g0237 | - | - | - | 0.0 |