Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g0240 | ATGGAACTGATTATCAATATCTTCACCCTCATTTTCATCGTTCTCTCCCTCTTCTGTCTCTCCTTCTTCATTCTCCTCCTCCGAACGCTCGCCGGAAAGTCCATAACCAACTCCGACTACCCGCCGGTGTACGGCACCATTTACGGCCAGGCTTTCTACTTCAACAACCTGTACGACCATCTGACGGCGGTGGCGAAACGGCATAGAACCTTCCGACTGATCGGGACGGCGTACAGCGAGATATACACGGTCGATCCGAGAAACATCGAACAGATATTGAAGACGAAATTCGACAAGTACTCGAAAGGAAGGAAAGATGAAGAAGTGTGTGGGGATTTGTTCGGAGAGGGAATTTTTTTGGTGGATGGAGAAAAGTGGAAGCAGCAGAGGAAATTGGCGAGCTATGAATTCTCGACGAAGATTGTTAGGGATTTTAGTTGCTCTGTTTTCAGAAGAAATGCGGGTAAACTTGTTGGAATTCTTTGGGAGTTCTCCGCCATGGCTCGGGTCTTCGATGTCCAGGATTTGCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTCGATTTGAATTGCTTGGAGGAACCAAGCAAAGCAGGGAGCGGGTTCATGAAGGCCTTTGATGATTCTAGCGCTCAGGTTTTTTGGCGCTACATCGATCCTTTCTGGAAATTTAAAAGATTTCTCAACATTGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAGGTAATCGATGCTTTTGTGCACCGGTTGATCAGTGCTAGGAGAAAATTGCTTCACCAACCAAATCTCAATGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCGACAAGAATGAATGATCAATATCTGAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAGGGATACAACTGCAGGAACTCTGTCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTGATACAGGAAAAAGTTGCAGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAGCTGATATAAATTTGTTCATACAAAACTTAACTGATTCAGCTCTTGATAAAATGCATTATCTCCATGCAGCATTGACAGAGACTCTAAGGCTCTACCCTGCTGTCCCTGTGGATGGAAGGACTGCAGAAATTGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCAGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCCCCTTTCAAATTCATAGCATTTCATGCGGGTCCTCGAACGTGTTTGGGAAAGGATTTTGCTTATCGACAAATGAAGATAGTATCTGCTACACTGCTTCATTTTTTTCGATTCAAATTAGCCGATCCAACGAGAAATATAACTTATAGGATCATGCTTACCCTTCACATCGATGGAGGTCTCCCACTTCTAGCAATCCCAAGAGCAAGAACATTTGCCTAA | 1539 | 44.25 | MELIINIFTLIFIVLSLFCLSFFILLLRTLAGKSITNSDYPPVYGTIYGQAFYFNNLYDHLTAVAKRHRTFRLIGTAYSEIYTVDPRNIEQILKTKFDKYSKGRKDEEVCGDLFGEGIFLVDGEKWKQQRKLASYEFSTKIVRDFSCSVFRRNAGKLVGILWEFSAMARVFDVQDLLMRCSLDSIFKVGFGVDLNCLEEPSKAGSGFMKAFDDSSAQVFWRYIDPFWKFKRFLNIGSEASFRNNLKVIDAFVHRLISARRKLLHQPNLNDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGRDTTAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEEADINLFIQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRTCLGKDFAYRQMKIVSATLLHFFRFKLADPTRNITYRIMLTLHIDGGLPLLAIPRARTFA | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2091815 | 2097278 | + | ClG42_05g0024000.10 | Clacu05g0240 | 247987 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g0240 | 512 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | SUPERFAMILY | Cytochrome P450 | 46 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PANTHER | CYTOCHROME P450 | 22 | 500 | - | - | |
| Clacu05g0240 | 512 | Gene3D | Cytochrome P450 | 42 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g0240 | 512 | CDD | CYP86A | 69 | 500 | - | - | |
| Clacu05g0240 | 512 | Pfam | Cytochrome P450 | 54 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g0240 | Clacu-Chr5:2091815 | Clacu11g0946 | Clacu-Chr11:9379073 | 6.40E-108 | dispersed | |
| Clacu05g0237 | Clacu-Chr5:2036781 | Clacu05g0240 | Clacu-Chr5:2091815 | 1.80E-139 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g0240 | - | - | - | 0.0 |