Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu05g0286 | ATGGAAGAAGAGCTGAAACTATTCAGAACGTGGTCGAGTCCGTTCCCTCTGAGGATAGTATGGGCGTTGAAATTGAAAGGATTAGAATACGATACCGTTTACGAAGATCTGGCCAACAAGAGCCCCTTGCTTTTGGAGTACAATCCGATTCATAAGAAAGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTTATTCTTGAATACATCGACGAAACATGGAAGCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCGTTGCTCGCTTTTGGGCCAAATTTGGGGATGACAAGGTTTTGGAATCTATAAAGAAAGTGTTTATGAACCAAGGGAAAGTGAGAGAGGAAGGTGTGGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAGTTAAAAGGAAAGAGGTTCTTTGGAGGGGAGGCCATTGGGTTTGTGGATATTACGGTTGGGTGGCTTGCAAACATAGCAAGTGTAGTGGAGGAAGTTGTTGGAGTTGAACTGATAACTGAACAAAGGTTTCCCCTCTTGTCCAAATGGATAAAGGAATTTGCTGCCTCTCCAATCATCAATGAAAACTGGCCGCCTAGAGACAAGCTTGTCACTAAGTACCAAGCAATGCGTCAAACTTTTATGAATAAACAAGCATAA | 669 | 44.25 | MEEELKLFRTWSSPFPLRIVWALKLKGLEYDTVYEDLANKSPLLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDETWKQNPLLPQDPYQRAVARFWAKFGDDKVLESIKKVFMNQGKVREEGVEEALENLKHLEEELKGKRFFGGEAIGFVDITVGWLANIASVVEEVVGVELITEQRFPLLSKWIKEFAASPIINENWPPRDKLVTKYQAMRQTFMNKQA | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2474634 | 2476812 | - | ClG42_05g0028600.10 | Clacu05g0286 | 248033 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu05g0286 | 222 | Gene3D | - | 84 | 221 | - | - | |
Clacu05g0286 | 222 | SUPERFAMILY | Thioredoxin-like | 5 | 104 | IPR036249 | - | |
Clacu05g0286 | 222 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
Clacu05g0286 | 222 | Pfam | Glutathione S-transferase, C-terminal domain | 117 | 194 | IPR004046 | - | |
Clacu05g0286 | 222 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Clacu05g0286 | 222 | SUPERFAMILY | GST C-terminal domain-like | 76 | 217 | IPR036282 | - | |
Clacu05g0286 | 222 | SFLD | Glutathione Transferase (cytosolic) | 2 | 221 | IPR040079 | - | |
Clacu05g0286 | 222 | Gene3D | Glutaredoxin | 1 | 83 | - | - | |
Clacu05g0286 | 222 | SFLD | Main.3: Omega- and Tau-like | 2 | 221 | IPR045073 | - | |
Clacu05g0286 | 222 | FunFam | Tau class glutathione S-transferase | 84 | 220 | - | - | |
Clacu05g0286 | 222 | Coils | Coil | 121 | 141 | - | - | |
Clacu05g0286 | 222 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 211 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Clacu05g0286 | 222 | CDD | GST_C_Tau | 88 | 207 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Clacu05g0286 | 222 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Clacu05g0286 | 222 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Clacu05g0286 | 222 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 210 | IPR010987 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu04g0813 | Clacu-Chr4:22451812 | Clacu05g0286 | Clacu-Chr5:2474634 | 1.30E-29 | dispersed | |
Clacu04g0814 | Clacu-Chr4:22456606 | Clacu05g0286 | Clacu-Chr5:2474634 | 3.70E-57 | dispersed | |
Clacu04g0815 | Clacu-Chr4:22463109 | Clacu05g0286 | Clacu-Chr5:2474634 | 1.30E-49 | dispersed | |
Clacu05g0286 | Clacu-Chr5:2474634 | Clacu06g1551 | Clacu-Chr6:26428750 | 1.10E-56 | dispersed | |
Clacu05g0286 | Clacu-Chr5:2474634 | Clacu05g2634 | Clacu-Chr5:34007930 | 1.50E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu05g0286 | K00799 | - | csv:101219529 | 413.305 |