Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0303 ATGGAGGTGAGTTGGGCTGTGGCGGCGGTAGCTGCAGCAGCGGCAGTGTATGCGGCGGTGAAATGGGCGGCGAAGAGTTTGAATGAGTGGATATATGAGGCGAAATTAGGTGATCGGCGGATGGCTCTGCCGCCGGGGGATTTGGGATGGCCTATAATTGGAAATATGTTGGGTTTTCTTAGAGCTTTCAAGTCCAAGAACCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAATAGGAGTGTACAAGGTTCATTTGTTTGGAAACCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGTTCTTACAGACGACCAGGCCTTTCAGCCCGGTTGGCCACGCGCGGCCGTAGAGCTCATCGGAAAGAAGTCCTTCATCGAAATGCCGGTAGAGGAACACAAGCGCCTTCGCCGCTTAACCTCTGCTCCGGTGAACGGTTTCGAGGCTTTGAGCAATTACATTCCTTACATCGAAGAGAATGTATTGAAATCGTTGGATAAATGGTCCAATATGGGGCCAATCGAATTCTTAACTCAACTTCGTAAGCTCACATTCACCATTATCATGTACATTTTCCTTAGCGCGGAGAGCGAATCGGCAATGGAGGCGTTAGAGAAGGAGTACACTCGGCTGAACTACGGTGTTCGAGCCCTGAGAATTAACATACCTGGATTTGCTTACCACAGAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGTTGCAAGCAATTGTTACTGATCGAAGAAAACGAAGATTGGACAAATGGGCGCCGATGAGGAAGGACGTGATGGACGCTCTGATTGATGTTGAAGATGAAAATGGCAGAAAATTGACTGATGAGGAGATCATTGATATCCTTGTGATGTACTTGAATGCTGGTCATGAATCTTCAGGCCATACCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCTAAGGCAGAGCAAGAGGAGATTGTGAGGAGGAGACCTCCAGGTCAAAAGGGATTGACTTTGAAAGAATGCAGGGAAATGGAATATCTCTCAAAAGTGGTCGACGAGACTCTTCGCTATGTATCATTCTCCCTTGTTGTCTTCAGAGAAGCACAGATGGATGTCAATCTTAATGGCTATCTAATCCCCAAGGGTTGGAAAGTCCTGGCTTGGTTCAGAAGCATTCACTATGACAGTGAAGTTTACCCAGACCCAAAGAAATTTGATCCTTCAAGATGGGATGGATTTATCCCAAAAGCAGGTGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGCCCAGGAAATGATCTAGCCAAATTGGAGATCTGTATTTTCATTCACTATTTTCTCCTCAATTACAAGCTTGAATGGCTGACCCCTGATTGTCCAATCTTGTATCTGCCCCATTCAAGGCCAAAGGACAATTGCTTGGCTAAAATCAGTAAGAATTCCAGCACTGTTGTGTAA 1479 46.52 MEVSWAVAAVAAAAAVYAAVKWAAKSLNEWIYEAKLGDRRMALPPGDLGWPIIGNMLGFLRAFKSKNPETFIDSYVSRFGKIGVYKVHLFGNPSVVVTTPETCRKVLTDDQAFQPGWPRAAVELIGKKSFIEMPVEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLKSLDKWSNMGPIEFLTQLRKLTFTIIMYIFLSAESESAMEALEKEYTRLNYGVRALRINIPGFAYHRALKARKNLVAALQAIVTDRRKRRLDKWAPMRKDVMDALIDVEDENGRKLTDEEIIDILVMYLNAGHESSGHTMMWATILLNQHPEVLKKAKAEQEEIVRRRPPGQKGLTLKECREMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDSEVYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFIHYFLLNYKLEWLTPDCPILYLPHSRPKDNCLAKISKNSSTVV 492
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 2598447 2605121 - ClG42_05g0030300.10 Clacu05g0303 248050
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0303 492 FunFam Ent-kaurenoic acid oxidase 34 487 - -
Clacu05g0303 492 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 Gene3D Cytochrome P450 34 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 SUPERFAMILY Cytochrome P450 39 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g0303 492 CDD CYP90-like 76 486 - -
Clacu05g0303 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu05g0303 492 PANTHER CYTOCHROME P450 26 42 464 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0303 Clacu-Chr5:2598447 Clacu09g1249 Clacu-Chr9:13023400 4.80E-129 dispersed
Clacu09g0926 Clacu-Chr9:8622650 Clacu05g0303 Clacu-Chr5:2598447 4.10E-109 transposed
Clacu10g0186 Clacu-Chr10:2165545 Clacu05g0303 Clacu-Chr5:2598447 7.40E-130 wgd
Clacu11g0418 Clacu-Chr11:3931952 Clacu05g0303 Clacu-Chr5:2598447 6.00E-21 wgd
Clacu05g0303 Clacu-Chr5:2598447 Clacu06g0073 Clacu-Chr6:886058 1.90E-197 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0303 K04123 - csv:101221667 930.628