Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0313 ATGTGCAAAGTTGAGATTAATCCTTGTTCAATAGTCATCTGGAGAAGTGGTTGGGAACTTAGATATAGCCCACTTAATTTCCTTTGGAAGATGGAGCAGCAATATCCACAACGAAGAGGAGCCGACGCAGTTTTACATCTTCAGCCAAACTCCTCAATTTCTATTGCATATCACTCACTTTTTGGTCCACACGATGATTTGGTTCTTCTTGAGGTTGATGAAAAGCTTCTGGAAGAAGTCCTCCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTGTTGCACGAAGTCGAAAACTTATGGAATCAAGTACGTGGGAACTTCCAATTCTGTACTTCTCATACCTCCATCTAGTCGATCAGAATACTACGAAAATGAGTTAGATAGCCATCAGGACAGCTCTAAAGAAGTTGCACCTGTGATTAAAGTAGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACCTTACAGCTTAGCTGATGAGTGGGAAAGTGAAGAGGTGGACAAATACAAAAAACGAATGTATAATTGGGATGATCTTATAAACAAGGTTCAGGCTAGCGATGATGAACTGAAAGCTGGATTACAAGCACTTTCCGCAGTTGAGATTGATGGGTTCTGGAGAGTCGTGGATGAAAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACACGATTTTAAATGACTGGTCTCTGGATGCACTTGATGAAGGTGTAATCATGAGAGTGATGAAAATGGATAGTTTTCCTGAAAAACTTGTGCAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGGAAACGAGGGGAAAGGTTGTTTATGGAGATTGGACGAGAAACAGGTTTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATTTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGCGTGCCAACTTTGATATGTTGGAAGGTGAAGTTCTGACTGAGAGACTTGGTGTTGAGACATGGGTTCGTGGTTTCAGAGTTTGTTCCTTGCCATTGAATCCTGCCGAGCGTTTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGTCTTTCTTCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAG 1269 42.32 MCKVEINPCSIVIWRSGWELRYSPLNFLWKMEQQYPQRRGADAVLHLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVCCTKSKTYGIKYVGTSNSVLLIPPSSRSEYYENELDSHQDSSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEPYSLADEWESEEVDKYKKRMYNWDDLINKVQASDDELKAGLQALSAVEIDGFWRVVDEKYMDSMLQMLLHNTILNDWSLDALDEGVIMRVMKMDSFPEKLVQHCLHVYGDKLDGNEGKGCLWRLDEKQVCVHFAREVLRKGKMKLEHFMDEWRQKIPLGMRANFDMLEGEVLTERLGVETWVRGFRVCSLPLNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2704394 2705819 - ClG42_05g0031300.10 Clacu05g0313 248060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0313 422 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 38 422 IPR019128 GO:0000775(PANTHER)|GO:0000785(PANTHER)|GO:0007064(InterPro)|GO:0031390(PANTHER)|GO:0031390(InterPro)|GO:0034088(PANTHER)
Clacu05g0313 422 Pfam Sister chromatid cohesion protein Dcc1 68 388 IPR019128 GO:0007064(InterPro)|GO:0031390(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0313 K11271 - csv:101203202 720.694