Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu05g0379 | ATGGGTAGCGGAGAAAAGGTTTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAGGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGACTTTGAAGACGTGGGCCACAGTGACAATGCAAGAGAGATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTTGCCTACACACCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA | 405 | 45.93 | MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3246844 | 3249209 | + | ClG42_05g0037900.10 | Clacu05g0379 | 248126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu05g0379 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Clacu05g0379 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Clacu05g0379 | 134 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
Clacu05g0379 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Clacu05g0379 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
Clacu05g0379 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 90 | IPR036400 | - | |
Clacu05g0379 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Clacu05g0379 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Clacu05g0379 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Clacu05g0379 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Clacu05g0379 | 134 | PANTHER | CYTOCHROME B5 | 5 | 131 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Clacu05g0379 | 134 | Gene3D | - | 2 | 86 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g0023 | Clacu-Chr1:235846 | Clacu05g0379 | Clacu-Chr5:3246844 | 2.20E-47 | dispersed | |
Clacu05g0057 | Clacu-Chr5:816252 | Clacu05g0379 | Clacu-Chr5:3246844 | 4.40E-36 | dispersed | |
Clacu05g0379 | Clacu-Chr5:3246844 | Clacu11g0355 | Clacu-Chr11:3210267 | 8.30E-15 | dispersed | |
Clacu06g0277 | Clacu-Chr6:3350116 | Clacu05g0379 | Clacu-Chr5:3246844 | 4.10E-30 | transposed | |
Clacu06g0331 | Clacu-Chr6:4032570 | Clacu05g0379 | Clacu-Chr5:3246844 | 2.20E-09 | transposed | |
Clacu08g1204 | Clacu-Chr8:21965189 | Clacu05g0379 | Clacu-Chr5:3246844 | 9.20E-27 | transposed | |
Clacu05g0379 | Clacu-Chr5:3246844 | Clacu06g0801 | Clacu-Chr6:9626866 | 7.90E-58 | wgd | |
Clacu05g0379 | Clacu-Chr5:3246844 | Clacu07g0185 | Clacu-Chr7:2289883 | 4.60E-50 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu05g0379 | K23490 | - | csv:101214209 | 275.404 |