Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0423 TTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTCCCGAGATCCACACATGACACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCGAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGTGCTTCTAAGTGCCCCTTTGTTTCGGGGCTTTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGCCATCTTTGAGAACAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACATTTGATGAATTTATTGGTCGGTTTACTATCTTGGCGCCTGATGTTTTGAAGGGGAGCTCTAATGAAGCGACTGCGTGTAAGAGGCTTTTGGAGAAAGTGAACCTTAAAGGGTATCAGATTGGTAAAACCAAAGTGTTTCTCAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTTTTGGGAAGATCTGCTATTGTTATCCAAAGGAAAGTTCGCTCATATTTGGGGCGCAAAAACTTTATTTTGTTGCGGTTGGCTGCTATTCAAATTCAAGCCCTGTGTAGAGGGCAAGTTGCACGCCAGCATTATGAAGACATCAGAAAGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGTATGCATTTTGCCCGATGTTGCTATAAAAGATTGTGCTCTTCAGCTGTAGCTATTCAAGCTGGTATCCACGGTATGATTGCCCGTAAAGAGCTTGAGTTCAGGAGGCAGACAAGAGCTGCTATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCGCATGCATTATTTGAGGATCAAAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGGAAAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAACAGGCGCTCTCCAAGCTGCTAAAAATCTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGAATGCGGGCTGACATGGAGGAAGCCAAGACTAAAGAAAACACAAAATTGAAGGCTGATTTGGAAGAAATGAGAACTCTATTTCAGGAAACGAAAGCACTGCTTAATGAGGAACGTGAAGCTGCAATGAAAGTAGTTGAGCAAGTTCCAGTCATACAGGAGGTTCCCGTTGTTGATCATGAGCTGATCAATAAGTTAACTACTGAAAATGAACAACTTAAGGCTCTTGTAAGTACTTTGGAAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGTCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATTGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAATTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAGATGTCTGGACGCATAGCAATGCAGCCTTTGGAAAATGGCCACCATGAATTACTAAGCAACGCTCCATCAAAAAAGTACGGTACTGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAATGAAGGCATGGATGCTCTGTCAAAATACCTGACACAGGATCTTGGATACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTTTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTTTTTGATCGGCTTATTCAGCTGATTGGTTCTGCAATCGAGAATCAGGATGATAATGATCTTATGACCTATTGGTTATCCAACACAACTACATTGTTGTTCCTTCTTCAAAAGAGTTTAAAAACCACACCACGGAAGCCTCCCACCCCTACATCATTTTTTGAGCGGATGACCCAAGGTTTTCGGTCATCTTCTGCCCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTGGAAGCCAAATATCCTGCCCTACTTTTCAAGCAGCAGCTAACCGCATATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCATTGATTTCAACTTGTATTCAGGCTCCCAGATCTTCGAGAGGAAATATTTTGAAATCATCTGGCCAGGAAAATAGTAGTAGCCCTTCCAGTAATTCATGGAGCAGCATCATTGATAACCTTAATGATCATCTCTGTAGATTGCAAAAGAACTTTGTGCCTAACGTTTTGGTTCAGAAGATATTCACTCAGGTTTTTTCATATATCAACGTTCAACTTTTTAACAGTCTTCTACTTCGTCGAGAGTGCTGTACGTTTAGCAATGGGGAATATGTGAAGTCAGGATTGGCTGAGTTAGAGATTTGGTGTGGCCAAGCACAAGAAGAGTATGCTGGGTCATCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGATCTCTGTCCAATATTGAGCGTTCAACAGCTTTATAGAATATGTACTCTTTATTGGGACGACAATTACAATACCAGGAGTGTAGCTCCAGATGTTATTTCTAGCATGAAGGTTTTGATGACTGAGGATTCCAATGATGAAGATAGTAGTTCCTTTTTGTTGGATGACAATTCCAGAATCTTCCGCTATGGTTGGGGTCGATATGTTGAGCCAGGCAAGTGGAATGGAATTTGTTTCGTAAGTATGGCACGTGAGTTATCATTGCAAATGTACTCGAATCTTACAGATCTATTGTATTGCATAATTTCTTCTACTAGTTCCTCCCCTGCCCTGAAACTGCTGATTACTAGGGTCTCAAGTCCGGAAGGAGGTGGCATACAAGGCTTGTTGAAATGGTTAAAATTCATTGATGCTTTGTGGTTAATGTCTGCCTTAGCGAGGCCCTTCCCCTTCAAAATGGTTGCACTATCAGGGTTTTAG 3336 41.28 FEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPAIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSNEATACKRLLEKVNLKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAIVIQRKVRSYLGRKNFILLRLAAIQIQALCRGQVARQHYEDIRKEAASIKIQKYWRMHFARCCYKRLCSSAVAIQAGIHGMIARKELEFRRQTRAAIIIQSRCRQYLARMHYLRIKKAAITTQCAWRGRVARKELRKLKMAAKETGALQAAKNLLEKQVEELTWRLQLEKRMRADMEEAKTKENTKLKADLEEMRTLFQETKALLNEEREAAMKVVEQVPVIQEVPVVDHELINKLTTENEQLKALVSTLENKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQTLLKPPSRKMSGRIAMQPLENGHHELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTQDLGYSEGKPVAAFVIYKSFLHWRSFEAEKTSVFDRLIQLIGSAIENQDDNDLMTYWLSNTTTLLFLLQKSLKTTPRKPPTPTSFFERMTQGFRSSSALPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLISTCIQAPRSSRGNILKSSGQENSSSPSSNSWSSIIDNLNDHLCRLQKNFVPNVLVQKIFTQVFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCGQAQEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMKVLMTEDSNDEDSSSFLLDDNSRIFRYGWGRYVEPGKWNGICFVSMARELSLQMYSNLTDLLYCIISSTSSSPALKLLITRVSSPEGGGIQGLLKWLKFIDALWLMSALARPFPFKMVALSGF 1111
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 3588151 3609599 - ClG42_05g0042300.10 Clacu05g0423 248170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0423 1111 Pfam DIL domain 869 974 IPR002710 -
Clacu05g0423 1111 Coils Coil 527 561 - -
Clacu05g0423 1111 Gene3D - 389 437 - -
Clacu05g0423 1111 Gene3D - 290 339 - -
Clacu05g0423 1111 Gene3D - 340 388 - -
Clacu05g0423 1111 SMART MYSc_2a 1 288 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu05g0423 1111 FunFam Myosin XI D 290 339 - -
Clacu05g0423 1111 Pfam Myosin head (motor domain) 1 275 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu05g0423 1111 ProSiteProfiles Myosin motor domain profile. 1 287 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu05g0423 1111 Pfam IQ calmodulin-binding motif 292 310 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 Pfam IQ calmodulin-binding motif 387 406 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 Pfam IQ calmodulin-binding motif 411 430 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 Pfam IQ calmodulin-binding motif 340 359 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 Pfam IQ calmodulin-binding motif 316 333 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 FunFam unconventional myosin-Va 389 436 - -
Clacu05g0423 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 341 IPR027417 -
Clacu05g0423 1111 SMART DIL_2 869 976 IPR002710 -
Clacu05g0423 1111 SMART iq_5 312 334 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 SMART iq_5 360 382 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 SMART iq_5 385 407 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 SMART iq_5 408 430 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 SMART iq_5 289 311 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 SMART iq_5 337 359 IPR000048 GO:0005515(InterPro)
Clacu05g0423 1111 FunFam unconventional myosin-Va 340 388 - -
Clacu05g0423 1111 ProSiteProfiles IQ motif profile. 338 367 - -
Clacu05g0423 1111 ProSiteProfiles IQ motif profile. 386 415 - -
Clacu05g0423 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 438 IPR027417 -
Clacu05g0423 1111 FunFam Class V myosin 1 136 - -
Clacu05g0423 1111 ProSiteProfiles Dilute domain profile. 701 994 IPR002710 -
Clacu05g0423 1111 Coils Coil 485 505 - -
Clacu05g0423 1111 Gene3D - 222 285 - -
Clacu05g0423 1111 Coils Coil 446 466 - -
Clacu05g0423 1111 ProSiteProfiles IQ motif profile. 313 342 - -
Clacu05g0423 1111 ProSiteProfiles IQ motif profile. 409 438 - -
Clacu05g0423 1111 Coils Coil 569 603 - -
Clacu05g0423 1111 Gene3D Kinesin motor domain 149 221 IPR036961 -
Clacu05g0423 1111 Gene3D - 1 147 - -
Clacu05g0423 1111 CDD MyosinXI_CBD 652 1012 IPR037975 GO:0007015(InterPro)
Clacu05g0423 1111 ProSiteProfiles IQ motif profile. 363 390 - -
Clacu05g0423 1111 PANTHER MYOSIN 1 386 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0423 Clacu-Chr5:3588151 Clacu09g0359 Clacu-Chr9:3107248 4.10E-293 dispersed
Clacu05g0423 Clacu-Chr5:3588151 Clacu06g0134 Clacu-Chr6:1483935 0.00E+00 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0423 K10357 - csv:101221506 1885.92