Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0483 ATGGGAAGAGAACAACTACAAGTGTTGAACGCACTTGATGTGGCCAAAACACAATGGTACCATTTCACAGCCATTGTGATAGCTGGAATGGGCTTTTTCACAGACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAGACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAACTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTACGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTTGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAGTATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCTGCCGCATTTGACGCCAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCCGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCCGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTAGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTATTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCCGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTATTCGTTGACGTTCTTCTTCGCAAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTTGGGTTTCAGTATGCTGAAAAGGGGATTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTTCCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAAGCAGAGTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA 1578 46.2 MGREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSDKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGIGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKAESRTQSDHRTMPV 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4012247 4013824 - ClG42_05g0048300.10 Clacu05g0483 248230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0483 525 CDD MFS_PhT 25 493 - -
Clacu05g0483 525 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Clacu05g0483 525 Gene3D MFS general substrate transporter like domains 273 518 IPR036259 -
Clacu05g0483 525 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
Clacu05g0483 525 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Clacu05g0483 525 MobiDBLite consensus disorder prediction 498 525 - -
Clacu05g0483 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
Clacu05g0483 525 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Clacu05g0483 525 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu05g0483 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0483 Clacu-Chr5:4012247 Clacu07g0111 Clacu-Chr7:1569448 1.00E-233 dispersed
Clacu05g0483 Clacu-Chr5:4012247 Clacu05g0485 Clacu-Chr5:4028377 2.00E-229 proximal
Clacu05g1023 Clacu-Chr5:9044423 Clacu05g0483 Clacu-Chr5:4012247 1.20E-186 transposed
Clacu11g2079 Clacu-Chr11:31635177 Clacu05g0483 Clacu-Chr5:4012247 1.40E-140 transposed
Clacu05g0483 Clacu-Chr5:4012247 Clacu06g0701 Clacu-Chr6:8185682 2.10E-231 wgd
Clacu05g0483 Clacu-Chr5:4012247 Clacu07g0092 Clacu-Chr7:1336078 3.30E-232 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0483 K08176 - csv:101209582 931.398