Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g0898 ATGGCTAATACTCCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCTACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGCAGAGAGGATTATTTACAGTTACCATAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCTGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAATAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAAAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGACGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAAATCGCCAAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCAGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACTGTCGGCGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGTAATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCAATTCCCAGTTGTATACATGGGGAGTAACTCGAGTAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGGATTAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTACGCATTAACGAATCGAAAAGCGACGGCGACTTTAGGGTTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCGGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCATCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGACTCCTCCGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCTCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAACCCCTACACAACTTAAAGTGTTCTCTAAATATTCGAACAGATCATGCCATCGTCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCCATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTCCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCGCCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGATGGAACTCATAAAGTGAGAAGCCCCATTGTGATCACTTGGTTGTCGTTTGTTTGA 2322 49.44 MANTPLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGAERIIYSYHNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATSSYRAVVTPFNGAAVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIVITWLSFV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7857985 7860306 + ClG42_05g0089800.10 Clacu05g0898 248645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g0898 773 CDD PA_subtilisin_like 354 483 - -
Clacu05g0898 773 Gene3D - 639 770 - -
Clacu05g0898 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 766 IPR045051 -
Clacu05g0898 773 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Clacu05g0898 773 Pfam PA domain 381 469 IPR003137 -
Clacu05g0898 773 FunFam Subtilisin-like protease SBT1.9 17 114 - -
Clacu05g0898 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Clacu05g0898 773 FunFam subtilisin-like protease SBT1.5 347 490 - -
Clacu05g0898 773 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Clacu05g0898 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Clacu05g0898 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Clacu05g0898 773 CDD Peptidases_S8_3 111 588 IPR034197 -
Clacu05g0898 773 Gene3D - 347 491 - -
Clacu05g0898 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu05g0898 773 Pfam Subtilase family 140 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu05g0898 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Clacu05g0898 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Clacu05g0898 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Clacu05g0898 773 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu05g0898 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0898 Clacu-Chr5:7857985 Clacu08g1797 Clacu-Chr8:27298284 1.40E-231 dispersed
Clacu01g2628 Clacu-Chr1:36435208 Clacu05g0898 Clacu-Chr5:7857985 3.00E-86 transposed
Clacu09g0137 Clacu-Chr9:1294650 Clacu05g0898 Clacu-Chr5:7857985 5.60E-212 transposed
Clacu01g0341 Clacu-Chr1:3436487 Clacu05g0898 Clacu-Chr5:7857985 7.80E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g0898 - - - 0.0