Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1109 ATGATAATGGAAATGCAAGGAGGAAGATCACTGGCTGAGACGCCTACCTACTCGGTTGCTTCTGTTGTTACCGTCATGGTCTTTGTCTGCTTGGTGGTGGAGCGGGCAATCTATAGGTTTGGAAAGTGGTTGAAGAAGACCAAGAGAAAGGCTCTGTTTGCTTCTTTGGAGAAAATCAAGGAAGAGTTGATGCTGCTTGGACTAATATCTTTGCTGCTGGCACAATGTGCAAGGTGTATCTCTGAAATTTGTGTGAACTCATCCCTTTTCACGAGCAGATTCTACATTTGTTCAGAAGAAGATTATGCCACCAATGAACATATTCTGCTTGAAAATTCTCTACTATCTCCTAATGAAACTGTCATTTCTCGAAGAGGATTAAGTGTTCTCCCGCATCAATGTGGTGAGGGTCGCGAGCCTTTTGTTTCATACGAGGGACTTGAACAACTTCACCGCTTCTTATTCGTTCTTGGGATCACTCATGTTCTTTATAGCTGTCTAGCTGTTGGTTTGGCAATGAGTAAGATATACAGTTGGAGGAAATGGGAAAATCAAGTTAAATTAGCTGCTGAAGAAAATTTGCCAGCTAAAAGAAATAAGGTGATGAGGCGGCAAACGACGTTTGTATTCCATCACACCTCTCATCCATGGAGCAGGAGTCGTATTCTCATATGGATGCTTTGTTTTCTACGTCAGTTCAAAAGTTCAATAAAGAAATCAGACTATTTGGCCCTCCGTTTGGGTTTCATTACAAAGCACAAATTACCAATTTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCATGGAATCCTCGGAATTAGCTGGCCACTATGGGGCTACGCCATCCTTTGCATCTTTGTCAACATTCACGGTTTAAATATCTACTTTTGGCTTTCTTTCATACCGGCCGCTCTTGTTATGCTGGTTGGTACAAAACTTCAACATGTAGTATCCTCTTTGGCACTCGAAGTTTTGGAACAGACAGGTCCAGCAATTGGGACTCAAATAAAACCAAGAGATGATCTGTTTTGGTTTGGAAAGCCTGAGATTTTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCGACATTTATCTGGTCCTTGTGGGGATTTAAGGAGAGATCTTGCTTCATGAAGAACAAGTTTATGATAATCACGAGGTTGACTTCAGGTGTTCTTGTTCAGTTTTGGTGCAGCTACAGCACAGTGCCACTTAATGTAATTGTTACACAGATGGGATCTAAGTGTAAGAAAGCATTGGTGGCTGAGAGTGTGAGAGATTCACTGCATAGTTGGTGCAAGAGAGTAAAGCAGAGGTCCAAACGTGACTCTGCGCAATCTGTCACTACAAGATCAGTATGTTCACTTGAATCACTGGTTGATGAACGAGATGAAATAACCATTGCGTCGGGTACGTTGTCACGGTGCTCATCTTTCGAAACTTCAAATCAGGTGACAATACAATCTACTTCCCAACTGGAGGCCATTATTGAGTCTTCAAGCTTAAGGAGGCATGAGCTTCCCTCAACTATGGCAGATTTTCTATCACAATCTGCAAGAGCTTCTCATGTTCATGCTAATAGCCTAGACAATAATGCAGAGAGTGGCCAAGATAGCAAGGTCGAGTCACTTTTCGACTTGTTCAAAAGGACATGA 1689 41.98 MIMEMQGGRSLAETPTYSVASVVTVMVFVCLVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLLLAQCARCISEICVNSSLFTSRFYICSEEDYATNEHILLENSLLSPNETVISRRGLSVLPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQVKLAAEENLPAKRNKVMRRQTTFVFHHTSHPWSRSRILIWMLCFLRQFKSSIKKSDYLALRLGFITKHKLPISYDFHKYMVRSMEDEFHGILGISWPLWGYAILCIFVNIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEVLEQTGPAIGTQIKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNKFMIITRLTSGVLVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRDSLHSWCKRVKQRSKRDSAQSVTTRSVCSLESLVDERDEITIASGTLSRCSSFETSNQVTIQSTSQLEAIIESSSLRRHELPSTMADFLSQSARASHVHANSLDNNAESGQDSKVESLFDLFKRT 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10064844 10071466 + ClG42_05g0110900.10 Clacu05g1109 248856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1109 562 Pfam Mlo family 8 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu05g1109 562 PANTHER MLO-LIKE PROTEIN 1 4 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1109 Clacu-Chr5:10064844 Clacu10g0063 Clacu-Chr10:993949 4.50E-139 dispersed
Clacu05g1109 Clacu-Chr5:10064844 Clacu09g1917 Clacu-Chr9:34077229 1.80E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1109 K08472 - csv:101204236 1009.98