Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1183 ATGGCTTCCCTCTCTATTGGGATTCATTTGCCTCCATCCCATCATTGGAAGAGATTTTCACTTCAGTCCCAGTCTCCCATTTCACTCCCATTTCACACCAGCTATGGTTCTTCGTTGAGTAGAGTCAGAACTCCAAGGTTGCTTCGTAAGAACCTTCTTATGCGGGCTGAAGACGAGGATAAAAGCTCTTCACCAGCAACCTCTTCTTCATTTGAACAACAGCAAGCTCCACCCAACTTCACTAAACAACTGGAGGAACTCTCATCCAAGTCAGGAACATGTGATCCCCTATGCTCAGTTGACGAAATAAGTTCGCAGGAGTTCGAAGATAGTTACCAGCCAAAGACCGACTTAGTAAAGGCTTTTGCAATATTTGCAGCTGCTCTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGATTATTGATGGCGGTTGGCTTATGGGTTGTTCGAAGTATTGGGGCTCCATCCACTGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTTGGGGCAATGACCATTGTGGAGATTATCGACGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACCACTCGAAAACCACGAACTCTCCTCTGGGTGATTGGGTTTGTAACCTTTTTCCTAAGTTCAATCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTTCCTCCATCAGAATATCGCAAGCTACTTGGAGCTGTAATCGTTATAGCAGCAAATGCAGGTGGTGCGTGGACGCCTATTGGAGATGTAACCACCACCATGCTATGGATACATGGTCAGATATCAACACTGCCAACACTCAAAGGCTTGATTATACCTTCAGCTGTTTCGCTTGCAGTACCGCTGGCCCTGCTGTCCCTTACAAGTGAAGTTAATGAAAAGGGACAGGATTTTTCAAATGTTATGGCGTCGGAGCAGATGGCTCCTCGAGGGAAGCTTGTCTTCTCTGTAGGTGTTGGAGCTTTAGTTTTTGTTCCAGTGTTCAAGGCTCTCACGGGTTTGCCCCCCTATATGGGTATGCTGCTTGGTCTTGGAATTCTCTGGATTCTGACTGATGCTATTCACTATGGTGAATCGGAAAGGCAAAAGTTGAAAGTTCCTCAGGCTTTGTCTCGTATCGATACGCAGGGAGCTCTATTTTTCCTTGGTATCCTTTTGTCTGTCAGCAGCTTAGAAGCTGCGGGTGTGTTACGCGAGTTAGCAAACTACCTTGATGCTCATATTCCGAACGTTGAACTCATTGCAAGTGCAGTCGGTGTTATATCAGCAATTATAGACAATGTACCATTAGTTGCAGCAACAATGGGCATGTATGACGTCTCCTCTTTCGCTCAAGATTCCGAGTTCTGGCAGCTAATTGCATTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTAAGAAAGGTTAGCGGTTTCGCTTTTGCGGGATATGCTGCTGGAATTGCTGCCTATTTAGCCCTTCATAGCCTCAACATATCGCTACCTACAACTATTGCTGAGGTGCCTTCCATTTTGGGTTCATAA 1746 44.9 MASLSIGIHLPPSHHWKRFSLQSQSPISLPFHTSYGSSLSRVRTPRLLRKNLLMRAEDEDKSSSPATSSSFEQQQAPPNFTKQLEELSSKSGTCDPLCSVDEISSQEFEDSYQPKTDLVKAFAIFAAALTGTVAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVGLWVVRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVIGFVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTLKGLIIPSAVSLAVPLALLSLTSEVNEKGQDFSNVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLRELANYLDAHIPNVELIASAVGVISAIIDNVPLVAATMGMYDVSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHSLNISLPTTIAEVPSILGS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10911865 10917328 + ClG42_05g0118300.10 Clacu05g1183 248930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1183 581 MobiDBLite consensus disorder prediction 56 77 - -
Clacu05g1183 581 NCBIfam sodium:proton antiporter NhaD 173 403 - -
Clacu05g1183 581 Pfam Citrate transporter 157 489 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu05g1183 581 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 54 578 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
Clacu05g1183 581 MobiDBLite consensus disorder prediction 63 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1183 - - - 0.0