Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1301 ATGGCGACGCTAATGTCGGGCTCCAGAATTCAACCAGCAGCTTCTGTTCTTTCCTCATCCATCAAGCGCCATGTGGGTTTTAATTCCCACCTTCGTTCCAATTGCTCGCTTTCTCGTTTTCACCATTCTTCATTCTCCTTCAGGCGCGCTGGACCTAGACGATCTCTCTCTGTTTCCATGTCCGTTACCCCTCTAGAAGCCTGCGTCAAAGCTTCCATTACCGTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAAAGGGTATTACTGACTTTGGAGGAAAAGCATGTACCCTATGACTTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAGGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATATTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCTACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCTAACGATGGAACAGAACAAGCATTGATTAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCTCTTTTATCAACGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTACAAGAACTGGTCTGTTCCAGACAGTCTTCCTTACGTTAAATCTTACATGAAGAGCATATTTTCAAGAGAATCATTTGCAAACACTCGTGCCCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCGAAGGTGTTTGGTTAA 825 43.52 MATLMSGSRIQPAASVLSSSIKRHVGFNSHLRSNCSLSRFHHSSFSFRRAGPRRSLSVSMSVTPLEACVKASITVPNKLGDCPFCQRVLLTLEEKHVPYDLKLVDLSNKPEWFLKINSEGKVPVVKFDEQWVADSDIITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALISELSSFNDHIKENGSFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFANTRALPEDVIAGWRPKVFG 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13237473 13242448 - ClG42_05g0130100.10 Clacu05g1301 249048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1301 274 Pfam Glutathione S-transferase, N-terminal domain 82 144 IPR004045 -
Clacu05g1301 274 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 65 271 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Clacu05g1301 274 SFLD Main (cytGST) 81 248 - -
Clacu05g1301 274 FunFam Glutathione S-transferase DHAR3 chloroplastic 63 151 - -
Clacu05g1301 274 SUPERFAMILY Thioredoxin-like 80 149 IPR036249 -
Clacu05g1301 274 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 72 150 IPR004045 -
Clacu05g1301 274 SUPERFAMILY GST C-terminal domain-like 145 272 IPR036282 -
Clacu05g1301 274 FunFam Glutathione S-transferase DHAR3, chloroplastic 152 274 - -
Clacu05g1301 274 SFLD Glutathione Transferase (cytosolic) 81 248 IPR040079 -
Clacu05g1301 274 CDD GST_N_family 82 143 - -
Clacu05g1301 274 Gene3D Glutaredoxin 63 151 - -
Clacu05g1301 274 Gene3D - 152 273 - -
Clacu05g1301 274 CDD GST_C_DHAR 151 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1383 Clacu-Chr2:27027525 Clacu05g1301 Clacu-Chr5:13237473 3.50E-69 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1301 K21888 - csv:101203335 504.597