Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1347 ATGGCGGCTCCGGCTGACCGGCTCCGCCCTGTTGTGAAGTTTTCCAGCCAGGGGATTCGTTTTGATGAGGATTCTGTGGAGACCCGGCCTCTGCTTTCCAGGATGCTGAATTATCCGATTGGGATTATTCACCACCAGTTGCGCCGCCGTCTTGGTGCCGGGAAGCCCCAGGTGCCAGGGCGACAGCAGTCTTTTAGTCGAGATCTTGGCCATGCAGCTGCGGAAACCCTTCTTATTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGTTACCGGTGGGTCGTAAAATTAACTGCTCTTGCAGTTTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTACTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAACCAAGAAATAGCTTGGATTTGTATCTACCTACAAATACTGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGTGGAGCTTGGATTATTGGGTATAAAGCATGGGGAGCACTTTTAGGACTGCAGTTGGCAGAGAGAGACGTCATTGTAGCCTCAATTGACTATAAAAACTTCCCTCAGGGTACAATCAGTGACATGGTGAGAGATGTTTCTCAAGGGATTTCATTTGTATGCAAGAATATAGCAGACTATGGAGGAGACCAAGACAGAATCTTTCTGATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCCAGAAAAGAAGAGAGTGTAGATTGGAGTGTCTCCCAAATAAAAGCTTATTTTGGTTTATCTGGAGGGTATAACTTGTTGAAACTAGTTGATCACTTTGATTGTCGGGGTCTATACCGTTCCGTCTTTTTGAGTATAATGGAAGGTGAAGAATCTTTGTCCCAATTTTCCCCGGAAATAAGAATCCAAGATCCAAGCATTAGTGATGTTGTACCCAGTTTACCTCCTTTTGTTCTTTTCCATGGCACTGGTGATTATTCAATCCCATCAGATGCCAGTGAAACTTTTGTGGAGACACTTCGAAAAGCAGGTGTACAAGCTGACCTCTTTCTCTATGAGGGAAAAACTCATACAGATTTGTTCCTTCAAGATCCCTTTAGGGGAGGCAGTTATGAACTTTTTGATCAAATAATTGCCATATTACATGCTGGTGATGATGAAGCCCTCGCAAAGGATTCAATGGCGCCGCCAAAACCGCGCCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 44.11 MAAPADRLRPVVKFSSQGIRFDEDSVETRPLLSRMLNYPIGIIHHQLRRRLGAGKPQVPGRQQSFSRDLGHAAAETLLITRLSFTLLRSLGVGYRWVVKLTALAVYAILLMPGFLQVMYDYYFSSQVRRDIIYGNQPRNSLDLYLPTNTDKKKPVVIFVSGGAWIIGYKAWGALLGLQLAERDVIVASIDYKNFPQGTISDMVRDVSQGISFVCKNIADYGGDQDRIFLMGQSAGAHISVCALLEQAIKEARKEESVDWSVSQIKAYFGLSGGYNLLKLVDHFDCRGLYRSVFLSIMEGEESLSQFSPEIRIQDPSISDVVPSLPPFVLFHGTGDYSIPSDASETFVETLRKAGVQADLFLYEGKTHTDLFLQDPFRGGSYELFDQIIAILHAGDDEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14410964 14417167 + ClG42_05g0134700.10 Clacu05g1347 249094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1347 426 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 391 IPR050300 GO:0016298(PANTHER)
Clacu05g1347 426 Pfam BD-FAE 141 350 IPR049492 -
Clacu05g1347 426 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
Clacu05g1347 426 SUPERFAMILY alpha/beta-Hydrolases 107 388 IPR029058 -
Clacu05g1347 426 Gene3D alpha/beta hydrolase 120 374 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1347 Clacu-Chr5:14410964 Clacu05g2511 Clacu-Chr5:33204319 2.30E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1347 K15889 - csv:101206540 636.721