Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1470 ATGGCACAAGTGGCCCTCGCTGTCTTCGGAGTTTTTCCAGTTTCCTCTTCGAATCGGTTGCGTTCAATTCCGCTCGACGCTCGTGGAGGTTCTATTACATCGACGATGGGAAGGCGATCCTTATGGGTTGCACTTCTTGTCTTTTCTCTTCTTCTTTCTCTGCGACCCCACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGGGTTCTAAAGATTCTGCCATTGAAAGTACTCCAGAGCAGGATTGGAACAATGCTCATGAGGTACATTGCTCAAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGAAAAAAAGAAATACAAGATTTCTACTAAGTGTAGACTTCACCCTGATAATGATATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTACGAAGAAAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGTGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGCGACCATGTGATAGATACAGTATCACCGAAAAGTAAATGCAATCCTGCTGCTGCCGCAAGAAATAAACATATGTGTGAGGGTCTTGCGGACAGCTGTTTTCCGGTTGATGAGGGTGCTTCGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGGGAATGAGAACTCGACCACAGGTACTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAG 945 43.81 MAQVALAVFGVFPVSSSNRLRSIPLDARGGSITSTMGRRSLWVALLVFSLLLSLRPHTVSSTLPLQSLIQGSKDSAIESTPEQDWNNAHEVHCSRERSRAAWKIIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNVSRSRCLADLCGALHCDHVIDTVSPKSKCNPAAAARNKHMCEGLADSCFPVDEGASASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17696200 17699112 + ClG42_05g0147000.10 Clacu05g1470 249217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1470 314 ProSitePatterns Zinc finger C2H2 type domain signature. 150 171 IPR013087 -
Clacu05g1470 314 PANTHER ZINC FINGER PROTEIN-RELATED 47 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1470 Clacu-Chr5:17696200 Clacu06g1868 Clacu-Chr6:29102570 2.10E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1470 - - - 0.0