Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1475 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGCCCTTTCGGAGTCACATCTCGACCCGAAGAAACGGTTGCTTCCGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAGGATATCCACATCGATCCGTTTACATCTCTGAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCCAAATCGTCCAAGCCTAAACCTAAACGGTCCAATCAAGATGCTCAAACCGATCTTGTTAATCACAATGTGAATAATGTACAACAGTACCCTTCTCGTCGGAATAGCTATGGCCCTTCGGGAAATACCAGGGAAGAACTGCGGGGTAGTAGATTAGGGGGTTACAGTAATGAAATGGAGGGGTTGAATTTGATTCAAGGCCCTGCCCCTGGTGGCGTTTACAGAGGCTATGCGCCGGTGACGGAGAATAGTCGAAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGGAGCAATGATTCGGCGGCCAATGATTTCTTTTGCCGGAGGATCGCAAAATTGTGCGATGTTATTGTCGTTGCCGTCGGGTATCGGCTTGCACCAGAGAACCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGTAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGGAATACCAAAGGCAATGGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGTGCGTCAATGGTAGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCAGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCCCAGGTTCTCCTGTACCCGTTTTTCGTTGGGAGTGTCCCCACTCATTCAGAGTTGAAGCTGGCCAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAGCTATTCCTACCCGAGGAAGAGTTTAGTCTTGACCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGTCCACCTCTTAAGCTCATGCCACCAACGCTGACAGTTGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCATGAATTTGCGACCCTCGATATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCTTATTGA 1419 48.98 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPETDSKPSSKSSKPKPKRSNQDAQTDLVNHNVNNVQQYPSRRNSYGPSGNTREELRGSRLGGYSNEMEGLNLIQGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17808093 17811167 - ClG42_05g0147500.10 Clacu05g1475 249222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1475 472 MobiDBLite consensus disorder prediction 79 143 - -
Clacu05g1475 472 Gene3D alpha/beta hydrolase 35 467 IPR029058 -
Clacu05g1475 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Clacu05g1475 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787(InterPro)
Clacu05g1475 472 PANTHER ARYLACETAMIDE DEACETYLASE 47 441 IPR050466 -
Clacu05g1475 472 MobiDBLite consensus disorder prediction 103 133 - -
Clacu05g1475 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1475 Clacu-Chr5:17808093 Clacu11g1028 Clacu-Chr11:12656330 3.70E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1475 - - - 0.0