Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1557 ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAAGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTCGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTACTACAAGCTCAGGATGATGTAGTAAACAATATGAAAGAGGCAGCATCAAAGGAGCTTCTGAATGTAAGCCAAAATGAACAAGTCTACAGAAATATTTTGAAGGATCTCATTGTTCAGAGCTTGCTCCGGCTGAAAGAGCCAGCTGTTTTATTGCGATGTCGCAAAAGTGACGTCCATTTGGTGGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGCACAAGTTCATGAGCCAGAGATCATTGTTGACCATGTCCATCTTCCACCTGGTCCAAGTCATCACCATCATCACGGTCCTTTCTGCTCTGGAGGTGTGGTATTGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA 690 45.36 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNNMKEAASKELLNVSQNEQVYRNILKDLIVQSLLRLKEPAVLLRCRKSDVHLVESVLGSAAVEYAEKAQVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21166919 21170255 + ClG42_05g0155700.10 Clacu05g1557 249304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1557 229 Pfam ATP synthase (E/31 kDa) subunit 16 224 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Clacu05g1557 229 SUPERFAMILY V-type ATPase subunit E-like 87 224 - -
Clacu05g1557 229 Gene3D - 1 62 - -
Clacu05g1557 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 226 IPR002842 GO:0033178(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Clacu05g1557 229 Coils Coil 38 61 - -
Clacu05g1557 229 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Clacu05g1557 229 Gene3D - 92 228 IPR038495 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1557 K02150 - csv:101217221 394.43