Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g1785 ATGGCTTTATTTCGCAAATTCTTTTATCGAAAGCCACCGGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGTTTTCGACTGTTGCTTTACAACGGAGGTTTTGGAAGAAGACGAATACAAGGTCTATATTGGAGGGATTGTTGGGCAACTTCGTGAGAGTCTCACCGACGCTTCATTCATGGTGTTCAATTTCCGAGAAGGGGAGAATCATAGCCTCGTTACTAATATATTATCTGTATATGATATGACTGTCATGGACTATCCTCGACATTATGAAGGCTGTCCTCTACTCACTATGGAGATGATCCACCACTTTTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGCCAACAGAATGTACTTTTGATGCACTGTGAAAGAGGGGGGTGGCCAGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAGTATGCTGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCACCGCGGGAACTTTTGCAGTTGATGTCACCTCTTAATCCATTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGCCTCAGAATGGCCTCCTCTTGACAGGGCTCTTACTCTAGACTGCATAATTATTAGATTTATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTTAGAATATACGGACAGGATCCCTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGGCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATCCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAGATGATGTTTCGAGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTAATGCTTAACCGTGATGACATTGATATTTTATGGCACGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTCTTTTTTCAGAGATGGATGCTTCCGCATCACTTATTTCAGTTGAGTTGCCAAATATTGAGGAGAAAGATGGTCTTCCAATTGAAGCATTTGCTAGAGTTCAAGAGATCTTTAGCAATGTGGACTGGCTAAGCCCAAAGGCAGATGCAGCTCTTAATGTGCTTCAGAAAATAACAGCTTCAAATTTACTTCAAGAGAAACTGGTTAGTTCCGGCTCTTTAGATAGAAACCAGTTGCTCGACTTATCTGTTGAAAAACTAATCTTGGAATCAGAGACATCTGAAGACAATATTGGAAGTCCCCGATTGAAGATACAGACAAAAAAATCTCAGCCTTCTTCCGAACTATCTCAGGCTGCAGGTTCAGAGAGATCAAAGATTGATCCCTCAGAATTGCAGGTTGCTCTCCAACTACCACCTCAGTCTAAAATCATCACCCAAAGAATACCTCAACCTTCATTGTCTACGCCGGCCTCCTTCCGTAGTTCTATGCAAGGTTCACCTCGCCCTATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACAAGATCATTCCAATTTTAGTGGTAAAGAAGTCATACATCCAGCGACAATATCTTCACCATCATCTGCTTTCTTGAGTTCAAGTGGTCTAGATTCACTTAAAGATATTCAACCTTGTATGCTTCCTATTTTGCCTCTCCCGCTAGCAATAGAGCCAAGATCTACATCAGAAAATTCTTCGACCACTGCGTCAACTTCAACCTCTCCCGATCCATTGTCACTTCACCAACTTTCTTTGAAACCTATTAAATCTTCAATTTCTCAACCTCCTCAAGCCACATCACGGGTGAGAAGTCAATTATCACCGTCTTCATTACAACCAACTTCTACCTCTTTTCCTGAGGAGTCCCCACCCTCCTTCAATGAGAGCGAAGCTTCAAGAACCTCTTCCTCTTGTTTGTTAATATCATCTCCATCTTCTTGTACTAAGGAATCATTTTCCATCTCCACCCCTCCCCCTCCCCCTCCCCCCCCTCCTCCTCTTCCCCATCTTGATTCACCTTTGGCTTTAGTAACTTCTCCGTCTTCTAGTAGGGAAAACAGTATTTTCCCATCCTCACCACAACCTCCTTCTACAACACTACTGTTATCCTCTACAAATACATCAATTCCATCTGTTCCTCAATTTTCTTCATCTGATGATTGTCTAGTTTCTTCTCAGTCACCTAAAAAGAACTTGACGAGTGTCTCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATGTTGTAGCCCTAACTTGGGCGCTAGTGTTGCCTCGCCAACACCAGTGCCCCCACCCCCACCTCCACCTCCTTCATGGAAGGATGCTACAGACACATTCATGCTTGATCCCCCACCTCCACCTCCAGCCCCACCCTTGCCTCCATCTTCTTTCAGTTCAACATCTACTTGTGACTCTAGTATCACGCCTTTAGGGCCACCACCGCCACCACCACCTCCTCCTAGTCATGCACCACAAGATTTTGCCACTGTAGTTAGGAACTTGATGGCTGTATCTGGCCCTCCACCTCCCCCACCTCCCCCACCTCCTCCATCTCATTCTTCTCTAGATCCTAATACTGTATCTTCAGTACCGCCGCCGCCACTCCCTCCTAGTCTTGCACCAAATGTTTCTACAACAACTGTTAACTTGACACATGTCTCTGGCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGTCCCACCTTATGTCCAGGTGCTGTAACGTCAGCTCCTCCTGCTCCGCCTCCTCCAGGTTTCTCAATGAAGGGTTCTGCAACACATGCTCCACCTGCACCCCCTCCTCCAGGTCTCAGTGGTAATAAACTCTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCATTAATAACAGCAACATACCTTCTGTTCCTGGACCACCTTCCAGCGCTCTATTCAATGCCAAGGGACGGGGCCTTGGACGTTTGAACTCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCATATCATTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCAGAGACACAAAAGACTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAGACTCCGGAGGTTCGGGTGGAAATTCAAATCGCCGAGCCTCAGGGCCAAAATCAGATAAAGTTCATTTGATTGAACTTCGACGGGCCTATAATTGTGAAATTATGCTTTCTAAAGTTAAGATTCCTTTGCCGGATATGATGTGTTCAGTCCTTGCATTGGATGATTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAGATGGAATTACTTAAGGGGTACAATGGGGATAAGGACAACTTGGGAAAATGTGAACAATTCTTTTTAGAGTTGATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCGATTGCAGGCCTGTGACCTTAGAAATAGTCTGAATACTATCAATTCGGCATCTGAAGAGGCAAATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACGATCCTTTCATTGGACAGTTAGGACACTCTGAGATACACTCTCGGACACTTAGTCGCCATGAAAATGTGTTCTGGTTTTTGGAGGCGCTCGCCTTACACTTGGATGAAGAAAATTTTGAGGAAGACAAGTTGAAGAAAACGAAAAAGAGTTCTGCTATTGGATTTCGACTTGATAGTCTCCTCAAACTCACTGATACACGAGCCAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTTCCAAAGGACCTTGTTAGTTTGGAAGCTTCTACAAAGATACAACTGAAATACTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAGGTCGTTCAGGAATTGGCTAATTCAGAGAACGATGGGCTCGTTTCAGGAACTTTTTGCCGGACTTTAAAAGACTTTCTTTCTCATGCTGAGGCCGAAGTGAGGTCTCTTGCCTCTCTTTATTCTAATGTGGGTAGAAATGCTGATGCATTGGCTCTCTATTTCGGCGAAGATCCAGCACGTTGCCCTTTTGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTTGTACGAGCGCATGAAGAAAACTGTAAGCAACTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGAGAAGTTGAAACTCAATACCACAAAGAAGGAGTCAGGATTCTTGATGCAGACTCCGACCTAG 4386 43.94 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGENHSLVTNILSVYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVLFSEMDASASLISVELPNIEEKDGLPIEAFARVQEIFSNVDWLSPKADAALNVLQKITASNLLQEKLVSSGSLDRNQLLDLSVEKLILESETSEDNIGSPRLKIQTKKSQPSSELSQAAGSERSKIDPSELQVALQLPPQSKIITQRIPQPSLSTPASFRSSMQGSPRPILRYHSAPSALGITALLQDHSNFSGKEVIHPATISSPSSAFLSSSGLDSLKDIQPCMLPILPLPLAIEPRSTSENSSTTASTSTSPDPLSLHQLSLKPIKSSISQPPQATSRVRSQLSPSSLQPTSTSFPEESPPSFNESEASRTSSSCLLISSPSSCTKESFSISTPPPPPPPPPPLPHLDSPLALVTSPSSSRENSIFPSSPQPPSTTLLLSSTNTSIPSVPQFSSSDDCLVSSQSPKKNLTSVSPPPPPPPPPPPPPPCCSPNLGASVASPTPVPPPPPPPPSWKDATDTFMLDPPPPPPAPPLPPSSFSSTSTCDSSITPLGPPPPPPPPPSHAPQDFATVVRNLMAVSGPPPPPPPPPPPSHSSLDPNTVSSVPPPPLPPSLAPNVSTTTVNLTHVSGPPPPPPPPFANSGPTLCPGAVTSAPPAPPPPGFSMKGSATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGINNSNIPSVPGPPSSALFNAKGRGLGRLNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAAAPNSDSGGSGGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDDSALDVDQVENLIKFCPTKEEMELLKGYNGDKDNLGKCEQFFLELMKVPRVESKLRVFSFKIQFRLQACDLRNSLNTINSASEEANQKFGKVEKGNANDPFIGQLGHSEIHSRTLSRHENVFWFLEALALHLDEENFEEDKLKKTKKSSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGLVSGTFCRTLKDFLSHAEAEVRSLASLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFVRAHEENCKQLDYEKKKAQKEAAEKEKLKLNTTKKESGFLMQTPT 1461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26968209 26981368 + ClG42_05g0178500.10 Clacu05g1785 249532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g1785 1461 Gene3D Formin, FH2 domain 999 1427 IPR042201 -
Clacu05g1785 1461 SUPERFAMILY Formin homology 2 domain (FH2 domain) 931 1436 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 437 456 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 571 666 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 437 461 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 667 684 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 774 790 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 688 745 - -
Clacu05g1785 1461 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Clacu05g1785 1461 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1005 1442 IPR015425 -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 825 841 - -
Clacu05g1785 1461 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Clacu05g1785 1461 Coils Coil 1417 1452 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 958 986 - -
Clacu05g1785 1461 Gene3D - 196 341 - -
Clacu05g1785 1461 SMART it6_source 670 1461 IPR015425 -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 797 812 - -
Clacu05g1785 1461 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 1000 1014 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 746 767 - -
Clacu05g1785 1461 Pfam Formin Homology 2 Domain 1007 1204 IPR015425 -
Clacu05g1785 1461 Pfam Formin Homology 2 Domain 1262 1416 IPR015425 -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 1059 1077 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 903 918 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 854 890 - -
Clacu05g1785 1461 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 571 1020 - -
Clacu05g1785 1461 MobiDBLite consensus disorder prediction 1059 1081 - -
Clacu05g1785 1461 SMART PTEN_C2_2 197 337 IPR014020 -
Clacu05g1785 1461 PANTHER FORMIN-J 1 1442 IPR051144 -
Clacu05g1785 1461 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1785 Clacu-Chr5:26968209 Clacu07g0225 Clacu-Chr7:2651977 1.40E-240 dispersed
Clacu05g1785 Clacu-Chr5:26968209 Clacu06g1324 Clacu-Chr6:24173019 2.10E-297 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g1785 K28090 - csv:101214019 2078.91