Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2095 | ATGTATATTCTTGTGGTTTTGGGTCTTGTTTTTGTCGGAATCGTCTTCAAATTTGTGTACGCCAATTTATGGGTTCCGTGGAGAATTCAAACCCACTTCAAAAACCAAGGGATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACAATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTACGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTTGGACTCGAGGGCGAACAATGGGTCGTCCACCGGAGAATCGCAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAGACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCACAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCCGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAACGGTTGACACTAGGAAAGGTCGACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAGCTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATTTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCTCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTTGTTAGGAGCTTATGGAATTGA | 1518 | 44.93 | MYILVVLGLVFVGIVFKFVYANLWVPWRIQTHFKNQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHNIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKEREDSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGKVDVPEGTQLQLSIAAIHHDTELWGEDASSFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29769619 | 29780751 | + | ClG42_05g0209500.10 | Clacu05g2095 | 249842 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 199 | 217 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | SUPERFAMILY | Cytochrome P450 | 36 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 19 | 496 | IPR050665 | GO:0004497(PANTHER) | |
| Clacu05g2095 | 505 | Gene3D | Cytochrome P450 | 27 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | Pfam | Cytochrome P450 | 79 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2095 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g1327 | Clacu-Chr5:13773394 | Clacu05g2095 | Clacu-Chr5:29769619 | 2.70E-98 | dispersed | |
| Clacu05g2095 | Clacu-Chr5:29769619 | Clacu11g0418 | Clacu-Chr11:3931952 | 2.30E-118 | dispersed | |
| Clacu05g2094 | Clacu-Chr5:29764392 | Clacu05g2095 | Clacu-Chr5:29769619 | 6.60E-147 | tandem | |
| Clacu05g2095 | Clacu-Chr5:29769619 | Clacu05g2096 | Clacu-Chr5:29784063 | 9.00E-22 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2095 | - | - | - | 0.0 |