Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2130 | ATGGAAATCATTTCACCCCATTTCAATCTCACCATACTTGGACTCTTCCTCTTCCTTCTCTCCTCTTTTTTCATTTTGAAAAAGCTAGCCACAGCCTACAAATACAGAGTCCCTCCAGAGGCAGCCGGCGGATGGCCGATCATCGGCCACCTCCGACTGCTACTCGGTCCAAAACTCCCCCACGAAACTTTGGGAGCCATGGCTGACAAATACGGACCAATATTCACCATTCGAGTTGGTATCCACAAAGCTCTGGTTATAAGCAATTGGGAAGTGGCTAAAGAGTGTTATACAACTCTTGATTCACTCATTTCTTCTCGTCCCAAAACTTTAGCTGGCCAATTGTTGGGCTACAACTTTGCTGGGTTTGGGTTCAGGCCAAATTACGATTCCTTTTACCGTAACATGAGAAAAATCATAGCCTCGGAGTTGCTTTCGAATCGGCGTTTGGAAAAACGGAGTGAGGTCAGAGTTTGTGAGGTGAAGAAAGCAGTGAAGGAGGTTTATGAATTGTGGATGAAAAAAAGAAAGGATTTGATTTTGGATATGGAAGAATGGATTGGAAATGTGAATTTGAATGTGATTTTGACGATGGTTTGTGGGAAGAGGTTGTTTGGGGAAGATGAGGAGATAATGAGACGGTGCCGGAAAGCGATGAGGGATTTTTTTGATTTGGGTGGGCAGTTTATGGTGGGAGATGCGATTCCATTTGTGAGATGGATGGATTTGGGTGGATATGAGAAGGCTATGAACATTACTTCAAGGGAATTGGATTGTTTTATTAGGGAATGGCTGGAAGAACAGCGCCGGAAGAGAGAGTCTGCCCTTGGGGGCGCCGTTGGAGATGGTCAACAGGATTTCATGGATGTGATGCTTTCGATTCTTGAAGGAGGAATGGACCTTGCTGGGTATGATGCTGATACAGTCAACAAAGCTACTTGCATGAGCCTTATTACTGGGGGAAGCGATACAGTAACAGTAACACTAACATGGGCGATCTCGTTTTTACTAAACAACCGAGAGGCATTAAGAAAGATACAAGAGGAGCTAGACATCCATGTTGGAAACAAAAGACTTGTGGATGAATCAGACATAAGCAAATTAGTGTATCTCCAAGCCGTAGTGAAAGAGACGTTAAGGTTGTACCCTGCAGGCCCACTATCGGGGATTCGAGAGTTCAGCCAAGATTGCACACTAAGAGGGTATCACGTGGCGGCCGGCACACGCCTCATTACTAACCTTTGGAAGATACAGACGGACCCTCGAGTTTGGGCCGAGCCTTTGGAGTTCAAGCCTGAGAGGTTTTTAGGTAGCCAGAAGCAGGTGGATGTTAAGGGCCAGAATTTTGAATTGGGGCCGTTTGGGTATGGAAGAAGGGCTTGTCCTGGGCTTGGGTTTGGAGTTCAAATGACCCAATTGGTGCTGGCCAGTTTCATTCATTCATTTGAAATTGGAACTCCTTTTGATGAACCGGTTGATATGGCGGCTAACTTTGGACTTACCATCCACCGAGCCAACCCTCTTCAACTTCTCATCAAGCCTCGTCTTCTAGCAAATGCTTATGCTTGA | 1569 | 45.7 | MEIISPHFNLTILGLFLFLLSSFFILKKLATAYKYRVPPEAAGGWPIIGHLRLLLGPKLPHETLGAMADKYGPIFTIRVGIHKALVISNWEVAKECYTTLDSLISSRPKTLAGQLLGYNFAGFGFRPNYDSFYRNMRKIIASELLSNRRLEKRSEVRVCEVKKAVKEVYELWMKKRKDLILDMEEWIGNVNLNVILTMVCGKRLFGEDEEIMRRCRKAMRDFFDLGGQFMVGDAIPFVRWMDLGGYEKAMNITSRELDCFIREWLEEQRRKRESALGGAVGDGQQDFMDVMLSILEGGMDLAGYDADTVNKATCMSLITGGSDTVTVTLTWAISFLLNNREALRKIQEELDIHVGNKRLVDESDISKLVYLQAVVKETLRLYPAGPLSGIREFSQDCTLRGYHVAAGTRLITNLWKIQTDPRVWAEPLEFKPERFLGSQKQVDVKGQNFELGPFGYGRRACPGLGFGVQMTQLVLASFIHSFEIGTPFDEPVDMAANFGLTIHRANPLQLLIKPRLLANAYA | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 30037273 | 30039121 | - | ClG42_05g0213000.10 | Clacu05g2130 | 249877 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2130 | 522 | CDD | CYP82 | 72 | 515 | - | - | |
| Clacu05g2130 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 190 | 208 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | FunFam | Cytochrome P450 82C4 | 29 | 513 | - | - | |
| Clacu05g2130 | 522 | Pfam | Cytochrome P450 | 43 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | SUPERFAMILY | Cytochrome P450 | 44 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | Gene3D | Cytochrome P450 | 30 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2130 | 522 | PANTHER | CYTOCHROME P450 82C3-RELATED | 21 | 516 | IPR050651 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g2197 | Clacu-Chr1:33314240 | Clacu05g2130 | Clacu-Chr5:30037273 | 2.10E-138 | dispersed | |
| Clacu05g2130 | Clacu-Chr5:30037273 | Clacu05g2132 | Clacu-Chr5:30054762 | 7.30E-208 | dispersed | |
| Clacu05g2129 | Clacu-Chr5:30021137 | Clacu05g2130 | Clacu-Chr5:30037273 | 1.10E-128 | tandem | |
| Clacu05g2130 | Clacu-Chr5:30037273 | Clacu05g2131 | Clacu-Chr5:30041360 | 3.20E-203 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2130 | - | - | - | 0.0 |