Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2130 ATGGAAATCATTTCACCCCATTTCAATCTCACCATACTTGGACTCTTCCTCTTCCTTCTCTCCTCTTTTTTCATTTTGAAAAAGCTAGCCACAGCCTACAAATACAGAGTCCCTCCAGAGGCAGCCGGCGGATGGCCGATCATCGGCCACCTCCGACTGCTACTCGGTCCAAAACTCCCCCACGAAACTTTGGGAGCCATGGCTGACAAATACGGACCAATATTCACCATTCGAGTTGGTATCCACAAAGCTCTGGTTATAAGCAATTGGGAAGTGGCTAAAGAGTGTTATACAACTCTTGATTCACTCATTTCTTCTCGTCCCAAAACTTTAGCTGGCCAATTGTTGGGCTACAACTTTGCTGGGTTTGGGTTCAGGCCAAATTACGATTCCTTTTACCGTAACATGAGAAAAATCATAGCCTCGGAGTTGCTTTCGAATCGGCGTTTGGAAAAACGGAGTGAGGTCAGAGTTTGTGAGGTGAAGAAAGCAGTGAAGGAGGTTTATGAATTGTGGATGAAAAAAAGAAAGGATTTGATTTTGGATATGGAAGAATGGATTGGAAATGTGAATTTGAATGTGATTTTGACGATGGTTTGTGGGAAGAGGTTGTTTGGGGAAGATGAGGAGATAATGAGACGGTGCCGGAAAGCGATGAGGGATTTTTTTGATTTGGGTGGGCAGTTTATGGTGGGAGATGCGATTCCATTTGTGAGATGGATGGATTTGGGTGGATATGAGAAGGCTATGAACATTACTTCAAGGGAATTGGATTGTTTTATTAGGGAATGGCTGGAAGAACAGCGCCGGAAGAGAGAGTCTGCCCTTGGGGGCGCCGTTGGAGATGGTCAACAGGATTTCATGGATGTGATGCTTTCGATTCTTGAAGGAGGAATGGACCTTGCTGGGTATGATGCTGATACAGTCAACAAAGCTACTTGCATGAGCCTTATTACTGGGGGAAGCGATACAGTAACAGTAACACTAACATGGGCGATCTCGTTTTTACTAAACAACCGAGAGGCATTAAGAAAGATACAAGAGGAGCTAGACATCCATGTTGGAAACAAAAGACTTGTGGATGAATCAGACATAAGCAAATTAGTGTATCTCCAAGCCGTAGTGAAAGAGACGTTAAGGTTGTACCCTGCAGGCCCACTATCGGGGATTCGAGAGTTCAGCCAAGATTGCACACTAAGAGGGTATCACGTGGCGGCCGGCACACGCCTCATTACTAACCTTTGGAAGATACAGACGGACCCTCGAGTTTGGGCCGAGCCTTTGGAGTTCAAGCCTGAGAGGTTTTTAGGTAGCCAGAAGCAGGTGGATGTTAAGGGCCAGAATTTTGAATTGGGGCCGTTTGGGTATGGAAGAAGGGCTTGTCCTGGGCTTGGGTTTGGAGTTCAAATGACCCAATTGGTGCTGGCCAGTTTCATTCATTCATTTGAAATTGGAACTCCTTTTGATGAACCGGTTGATATGGCGGCTAACTTTGGACTTACCATCCACCGAGCCAACCCTCTTCAACTTCTCATCAAGCCTCGTCTTCTAGCAAATGCTTATGCTTGA 1569 45.7 MEIISPHFNLTILGLFLFLLSSFFILKKLATAYKYRVPPEAAGGWPIIGHLRLLLGPKLPHETLGAMADKYGPIFTIRVGIHKALVISNWEVAKECYTTLDSLISSRPKTLAGQLLGYNFAGFGFRPNYDSFYRNMRKIIASELLSNRRLEKRSEVRVCEVKKAVKEVYELWMKKRKDLILDMEEWIGNVNLNVILTMVCGKRLFGEDEEIMRRCRKAMRDFFDLGGQFMVGDAIPFVRWMDLGGYEKAMNITSRELDCFIREWLEEQRRKRESALGGAVGDGQQDFMDVMLSILEGGMDLAGYDADTVNKATCMSLITGGSDTVTVTLTWAISFLLNNREALRKIQEELDIHVGNKRLVDESDISKLVYLQAVVKETLRLYPAGPLSGIREFSQDCTLRGYHVAAGTRLITNLWKIQTDPRVWAEPLEFKPERFLGSQKQVDVKGQNFELGPFGYGRRACPGLGFGVQMTQLVLASFIHSFEIGTPFDEPVDMAANFGLTIHRANPLQLLIKPRLLANAYA 522
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 30037273 30039121 - ClG42_05g0213000.10 Clacu05g2130 249877
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2130 522 CDD CYP82 72 515 - -
Clacu05g2130 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 FunFam Cytochrome P450 82C4 29 513 - -
Clacu05g2130 522 Pfam Cytochrome P450 43 502 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 SUPERFAMILY Cytochrome P450 44 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2130 522 PANTHER CYTOCHROME P450 82C3-RELATED 21 516 IPR050651 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g2197 Clacu-Chr1:33314240 Clacu05g2130 Clacu-Chr5:30037273 2.10E-138 dispersed
Clacu05g2130 Clacu-Chr5:30037273 Clacu05g2132 Clacu-Chr5:30054762 7.30E-208 dispersed
Clacu05g2129 Clacu-Chr5:30021137 Clacu05g2130 Clacu-Chr5:30037273 1.10E-128 tandem
Clacu05g2130 Clacu-Chr5:30037273 Clacu05g2131 Clacu-Chr5:30041360 3.20E-203 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2130 - - - 0.0