Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2182 ATGGGCGAGATTTTTGTATCTGTTTTGGTGTTTTTTCTCACTCTATTATGGTACATTTCTTTAAAGAGAAACAAGAAGGAAGCCATTAAAAATGGAACTAAGCTCCCTCCTGGTTCTTTGGGATGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAAGACCCTGAATCTTTCTTCGCCACCAAACAGAAAAGGTATGGGGAGATTTTAAAGACGCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCTGAGGCAGCAAGGTTTGTGCTAATGACACAGGCTCATTTGTTCAAGCCAACTTACCCCAAAAGCAAAGAACTTTTGATTGGCCCCTCTGCTCTGTTTTTTCACCAAGGTGACTACCATTGCCGTCTGAGGAAACTGGTTCAGAACTCTCTTTCTTTGGATGCCATCCGCACCTTAGTCCCCGATATCGACTCCGCCACCGCTTCCGCCCTTGACTCCTGGGCCAGTTCCGTACTCATTAGCACCTTTCATGAAATGAAAAAGATATCATTTGAAGTTGGGATATTGACCATTTTTGGCCATTTGGAAGCGGCTTACAAAGAGGAGCTTAAAAACAACTATAGCATATTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGCGGCTAAGTAAAATCCTAGGTGACATAATCCATGAGAGAAGAGAAAAAAGACTGGGGGAAAAGGATCTATTGGGAAGCCTTCTAAACTCCATTGATGATGAAGGTGAAGTTAAAATAAGCGATGCCCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCAGCTCAAGACACCACTGCCAGTGTCATGACTTGGATTGTTAAGTACCTCCATGACCAACCTAAGCTTCTTCAATCCGTAAAGGAAGAGCAAGAGGAAATTAAAAAATTAAATTGTGAGAATAATCAAGGGTTGAACTGGGTTCAGACAAGAAACATGCCAATGAGTTACAAGGTGGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCGTTCACTTTTAGAGAGGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCAGAAACATCCATCATAGTCCAGAATATTTCCCCGATCCTCACAATTTCGACCCTTCTAGATTTGAGGTTGCACGAAAACCCAATACATTTATGCCGTTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCAAAGCTGGAGATGTTGATCATGATTCATCATCTAGTCACCAAGTTCAGGTGGGAATTGGTTGGTACGCAAAACAGGGTTCAACACAGTCCATTTCCCGTTCCCTTGCAAGGCCTTCCAGCCAGATTTTGGAAGATAGGCCATTAG 1413 42.75 MGEIFVSVLVFFLTLLWYISLKRNKKEAIKNGTKLPPGSLGWPYIGETLQLYSQDPESFFATKQKRYGEILKTHILGCPCVMLASPEAARFVLMTQAHLFKPTYPKSKELLIGPSALFFHQGDYHCRLRKLVQNSLSLDAIRTLVPDIDSATASALDSWASSVLISTFHEMKKISFEVGILTIFGHLEAAYKEELKNNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKILGDIIHERREKRLGEKDLLGSLLNSIDDEGEVKISDAQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQSVKEEQEEIKKLNCENNQGLNWVQTRNMPMSYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFPDPHNFDPSRFEVARKPNTFMPFGSGVHACPGNELAKLEMLIMIHHLVTKFRWELVGTQNRVQHSPFPVPLQGLPARFWKIGH 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30441181 30444298 - ClG42_05g0218200.10 Clacu05g2182 249929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2182 470 Pfam Cytochrome P450 36 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PANTHER CYTOCHROME P450 26 34 445 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Clacu05g2182 470 FunFam Abscisic acid 8 25 467 - -
Clacu05g2182 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu05g2182 470 Gene3D Cytochrome P450 24 468 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2182 470 CDD CYP90-like 64 464 - -
Clacu05g2182 470 Coils Coil 299 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0632 Clacu-Chr2:6219695 Clacu05g2182 Clacu-Chr5:30441181 9.70E-181 dispersed
Clacu05g2182 Clacu-Chr5:30441181 Clacu09g0966 Clacu-Chr9:9067824 2.30E-75 dispersed
Clacu03g0133 Clacu-Chr3:1445595 Clacu05g2182 Clacu-Chr5:30441181 3.80E-148 transposed
Clacu06g1515 Clacu-Chr6:26053759 Clacu05g2182 Clacu-Chr5:30441181 1.60E-60 transposed
Clacu07g1111 Clacu-Chr7:25750565 Clacu05g2182 Clacu-Chr5:30441181 3.60E-158 transposed
Clacu09g2250 Clacu-Chr9:37306774 Clacu05g2182 Clacu-Chr5:30441181 8.60E-52 transposed
Clacu05g2182 Clacu-Chr5:30441181 Clacu08g1754 Clacu-Chr8:26951111 1.50E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2182 K09843 - csv:101213916 870.537