Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2231 ATGAGGATGATTAGTGGGAAACGGTATTTTGGTGTGGAAGTGGAGAATGTGGAGGAAGCCTTGGAGTTTAGGGAGATTATGAAGGAGCTTCTTGAATTGAGTGGGGTGACGAATGCAGCGGATTTTTTGCCCATTTTGAGAGTGTTTGATTTTCAAGGACTTGAGAAGAGGATGTTGAAAGCGAGTGGGCGAGCTGATGTTTTCCTACAAAAACTCATTGATGAACACAGGGAAAGGAGAGTTTCACGTTGGCCGGAGGACAAACATGGAAAAACCATGATTCAAACTCTGCTCTCCTTGCAAGAATCTCAACCCCATTATTACTCCGATGATATAATCAAGGGTCATCTTCTGACGATGTTGGCTGCGGGTACTGATACAACTTCAGGAACAATAGAATGGGCGATGTCGCTACTTTTGAATCATCCAACGGTGATGAAGAAAGCTTGGATTGAGATAAGAGAAAGGGTTGGGGAGAATCGGATGGTGGAGGAAGGCGATGTAAGTAACCTCAAATATGTGGAAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGCAGCTCCACTGTTGGTCCCACATGAATGTTCTGAAGATTGTAGAATTGAAGGATTTGAGGTAGCCAAAGGAACAATGTTGTTGGTGAATGCATGGGCCATTCATAGGGACTCCAAAGTGTGGGAACATCCCACCAGCTTCCAACCAGAGAGGTTTCTAAATTGGGAAGGCGTTGAATCCTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGCCCAGGGGCTGCCCTTGCCCAACGAGTCGTGGGATTAACATTGGCCACTTTGATTCAGTGCTTTGAGTGGGACAAGGTTGATGAGCAACAAATAGACTTGTCTGAAGGAAGTGGAATAACTATGCCTAAAGCCAAAGCTTTGGAGGCAATGTGTAAACCTCGTACCTCCATGCTTCATTTACTGGCTCATCTTTGA 972 45.37 MRMISGKRYFGVEVENVEEALEFREIMKELLELSGVTNAADFLPILRVFDFQGLEKRMLKASGRADVFLQKLIDEHRERRVSRWPEDKHGKTMIQTLLSLQESQPHYYSDDIIKGHLLTMLAAGTDTTSGTIEWAMSLLLNHPTVMKKAWIEIRERVGENRMVEEGDVSNLKYVEAIIYETLRLFPAAPLLVPHECSEDCRIEGFEVAKGTMLLVNAWAIHRDSKVWEHPTSFQPERFLNWEGVESYKWIPFGMGRRACPGAALAQRVVGLTLATLIQCFEWDKVDEQQIDLSEGSGITMPKAKALEAMCKPRTSMLHLLAHL 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30806220 30807767 - ClG42_05g0223100.10 Clacu05g2231 249978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2231 323 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 252 261 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 259 282 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 249 259 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 112 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 132 158 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS E-class P450 group I signature 216 240 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS P450 superfamily signature 176 187 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS P450 superfamily signature 259 270 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS P450 superfamily signature 250 259 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 PRINTS P450 superfamily signature 123 140 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 Gene3D Cytochrome P450 1 318 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 SUPERFAMILY Cytochrome P450 8 313 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 Pfam Cytochrome P450 6 304 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2231 323 FunFam Os02g0503850 protein 179 303 - -
Clacu05g2231 323 PANTHER CYTOCHROME P450 82C3-RELATED 1 315 IPR050651 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2231 Clacu-Chr5:30806220 Clacu06g0154 Clacu-Chr6:1753524 3.00E-95 dispersed
Clacu05g2231 Clacu-Chr5:30806220 Clacu05g2235 Clacu-Chr5:30821700 9.10E-84 proximal
Clacu01g1782 Clacu-Chr1:30030663 Clacu05g2231 Clacu-Chr5:30806220 1.90E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2231 - - - 0.0