Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2264 ATGGCCATTCTTGTTTTCCGCTTCTCTATTCTCTCCGTTCTTCTTTTTCAAGTCCTCTCCGCCAACTCTTGGTGGACGGTGAAGTTTCTTCCTGGATTTTCAGGTCCTCTTCCTTTCGTACTCGAAACTGGATACGTGGGAGTTGGGGATAATGAGGAAGTCCAATTGTTTTACTATTTTGTAAAATCACAAGGAAATCCTCAAAAAGATCCTCTCCTTTTGTGGCACACCGGCGGCCCCGGTTGCTCCGGTTTATCTGGACTCGCATTTGAAATTGGTCCTCTTAATTTCAAGGAACAGCAGTATAATAGGAGTCTACCCCAACTAATTTTGAACCCCTTTTCATGGACCAAGAACTGTAGTATAATCTTTCTAGATTTGCCCGTCGGTACTGGATTTTCGTATGCTAAAACTCCCCAAGCTCTCCAGACGGGAGATTTTGGTCAAGTTCAAACTTCTCATCAATTCTTGAGAAAGTGGTTGGTCGAGTATCATCCAGAATTTATATCTAATCCATTCTATGTTGGTGGAGACTCATATTCTGGTCTTATTGTTCCCGTTGTTACTCATGAAATATTAGAAGGAAATAAACGTGTTTTGCCATTAGTAAATCTTCAGGGATACATATTGGGAAATCCTATCACTATCCGTAATTCACATAAAAATTTTGCAATCCCTTTTGCTCATAGAATGACACTCATCTCTGATGAATTATTCGAGTCTTTGACGACTAGTTGCAATGGAGAGTATGTGAACATTGATCCTACTAATGTTGAGTGCTTGAGACATTATGATACCTACGAAAAGAGTGTTTCAAAAATTTACGATGGGAATATTTTGTTGCCAAAATGTCCCTCGGCATCTTGGAAATTACAAGATATGTCTGCTCGAAGATCTCTCTACAAAACTCCCAAAGTACTCCGTGATCTAAAGCTACCACTTCCAACTCTTGGCTGTCCTACATATAAATACTTACTTTCTCACTACTGGGCTAACGATAATCAAGTTCGAAAAGCGCTTCACATTCAAGAGAGAAGCATTGGAGAATGGACAAGATGTCAGTATAGAGATGATTACAGTTTTGATATTGACAGTTCATTGCCGTATCATGTGAACCTTAGCTCTAAAGGTTATCGATCTTTAATCTATAGTGGAGATCACGATATGGTGGTGTCTCATTTAGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGATGACTGGAGGCCATGGTTCGTCATGGATCAAGTAGCGGGATACACGAGAACCTTTGCAAATAAGATGACATTTGCAACAATAAAGGGTGGAGGGCATACAGCAGAATACACACGACAAGAATGTAGCATCATTTTCAATAGATGGATAACTAATAAATCATTGTAA 1392 39.22 MAILVFRFSILSVLLFQVLSANSWWTVKFLPGFSGPLPFVLETGYVGVGDNEEVQLFYYFVKSQGNPQKDPLLLWHTGGPGCSGLSGLAFEIGPLNFKEQQYNRSLPQLILNPFSWTKNCSIIFLDLPVGTGFSYAKTPQALQTGDFGQVQTSHQFLRKWLVEYHPEFISNPFYVGGDSYSGLIVPVVTHEILEGNKRVLPLVNLQGYILGNPITIRNSHKNFAIPFAHRMTLISDELFESLTTSCNGEYVNIDPTNVECLRHYDTYEKSVSKIYDGNILLPKCPSASWKLQDMSARRSLYKTPKVLRDLKLPLPTLGCPTYKYLLSHYWANDNQVRKALHIQERSIGEWTRCQYRDDYSFDIDSSLPYHVNLSSKGYRSLIYSGDHDMVVSHLDTQAWIKSLNYSIVDDWRPWFVMDQVAGYTRTFANKMTFATIKGGGHTAEYTRQECSIIFNRWITNKSL 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31016737 31020316 - ClG42_05g0226400.10 Clacu05g2264 250011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2264 463 SUPERFAMILY alpha/beta-Hydrolases 27 461 IPR029058 -
Clacu05g2264 463 Gene3D alpha/beta hydrolase 34 463 IPR029058 -
Clacu05g2264 463 FunFam Serine carboxypeptidase-like 11 21 463 - -
Clacu05g2264 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Clacu05g2264 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Clacu05g2264 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Clacu05g2264 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Clacu05g2264 463 Pfam Serine carboxypeptidase 31 460 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Clacu05g2264 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 457 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Clacu05g2264 463 FunFam Carboxypeptidase 318 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2264 Clacu-Chr5:31016737 Clacu05g2868 Clacu-Chr5:35867962 1.20E-185 dispersed
Clacu05g2264 Clacu-Chr5:31016737 Clacu05g2265 Clacu-Chr5:31025333 1.50E-185 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2264 K16296 - csv:101207623 586.26