Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2283 ATGGAAGACGATTCGCTTAAACGAAGCAGTTCAGAAAATTTCAAGCAAGAAATGAAAATTATTTCGAGCATTTTCTCTCGCCAATCTACGTCAACTTTGGCGCCTCATAATTTTGCTGCTCGGCTAGGAAAATATAAATGCTGTGCGAAGACAGTGGTGCTTTGCATCTACTTGTCTCATCCCTCTGCTCCTAGAATTTCATTTCTTCGCTGTAAGCTTGAGAGCTTTGTTTCTGTTAAGCAGCGTACTCTGGAGGATACTTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCATCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACGGTAGGCCAAGATGCTGTCACTCAAATTTGTGTTTCGAAGGAGCTTGCGACAACTTGGCTTCCATGTGCAGCAAAAGCCAAAACAGGAGTAAAAGTTGCGAAGAACAGTCGTCTTAAACTTCTTGAATTTTTAGATCCTGACTATGGTTCGAGGCGTATTTTAGCCTCAAAAGGAGACGATGCGTGCGCTAAGAGGGGTCAACTTGCTTTCGTGTCTGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTATTGGCTGTTTTCCATGTTCTATACTGCATCACCACTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACAAAAACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCCAGAGATACAACATTTGGACGCCGGCACTTGAGCTTTTGGAGTCGTACACCACTTTCCCTCTGGATTGTTTGTTTCTTCCGACAATTCTTTGGATCAGTTACCAAGGTTGATTACATGACACTGAGGCATGGATTCATCGTTGCACATCTAGCGCCCGGAAGTGAAGTAAAATTCGATTTCCATAAATACATCAGCAGATCTCTCGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCAGCAATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAGTTATAATTCTGTTGGTGGGAACGAAGCTCCATGTTATCATAACTCAAATGGGATTGACAATTCAAGAAAGGGGCCACGTTGTGAAGGGTGTTCCCGTCGTTCAGCCCCGGGATGACCTGTTTTGGTTCGGACGTCCACAACTTATTCTCTTTCTGATTCACTTTGTTCTCTTTATGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACGTACGCATTTAAGTGGAGAGCTTGCTTCCATCAACGAATTGAAGATATTGCCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCTTTGGTGACTCAGATGGGCTCTAATATGAGACCAACCATTTTCAACGACCGAGTGGCGACGGCATTGAAGAACTGGCACCACTCTGCCAAGAAGAACATGAAGCACCAGCGCAACCCAGACAGTACCTCACCATTCTCAAGCAGGCCAACTACTCCAACTCACGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCTGATGCAGAACCAGATCGTTGGGACATTGAAGAGTTGCCTCCTTCTTCACACCATAGTAGAGCCCATGATAATCAAGAACAAGAACATTCTGAGACAAATAGAGAACAGGAGATGACAGTTCAACGGCCAAGTTCAACAGAAACTAGTTCCATGACACGTCCTGCTCGCCCTCAACATGAAATCACTAGGAGTCCCTCAGACTTCTCATTTGCCAAATGA 1935 43.77 MEDDSLKRSSSENFKQEMKIISSIFSRQSTSTLAPHNFAARLGKYKCCAKTVVLCIYLSHPSAPRISFLRCKLESFVSVKQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTVGQDAVTQICVSKELATTWLPCAAKAKTGVKVAKNSRLKLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCITTLALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPLSLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLVIILLVGTKLHVIITQMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMNAFQLAFFAWTTYAFKWRACFHQRIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMRPTIFNDRVATALKNWHHSAKKNMKHQRNPDSTSPFSSRPTTPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWDIEELPPSSHHSRAHDNQEQEHSETNREQEMTVQRPSSTETSSMTRPARPQHEITRSPSDFSFAK 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31197283 31203102 + ClG42_05g0228300.10 Clacu05g2283 250030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2283 644 MobiDBLite consensus disorder prediction 566 608 - -
Clacu05g2283 644 PANTHER MLO-LIKE PROTEIN 1 80 608 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu05g2283 644 MobiDBLite consensus disorder prediction 535 551 - -
Clacu05g2283 644 MobiDBLite consensus disorder prediction 524 644 - -
Clacu05g2283 644 MobiDBLite consensus disorder prediction 609 644 - -
Clacu05g2283 644 Pfam Mlo family 81 562 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2159 Clacu-Chr2:34760712 Clacu05g2283 Clacu-Chr5:31197283 6.40E-192 dispersed
Clacu03g0235 Clacu-Chr3:2721679 Clacu05g2283 Clacu-Chr5:31197283 7.20E-125 dispersed
Clacu05g2283 Clacu-Chr5:31197283 Clacu10g0013 Clacu-Chr10:539007 2.70E-127 dispersed
Clacu05g2283 Clacu-Chr5:31197283 Clacu03g0233 Clacu-Chr3:2666744 5.50E-189 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2283 K08472 - csv:101218929 1075.85