Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2321 ATGGTGGCCTGCAGAGGAATCTCGAGGTGCTGCAACATATGGAGCATCGTCGTCCATGTCATCACTGGGCGGTGGTTCACTCCTAATCATGGTGACAGCCGGAACATTGTTCATGATTTGGGCGCAAACGTAGGCATTTTGTCTGGGCTTATTAACGAGGTTACACCACCGTGGGTGGTTCTATCCATCGGCGCCGTTTTGGATTTCTTTGGTTACTTTATGATTTGGTTGGCTGTTACTAAGCGAATCTCTGCCCCCAAAGTTTGGCAAATGTGTCTTTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACAGGATCTCTTGTTACTTGTGTCAAGAACTTCCCCGAGAGCCGTGGTGTTGTTCTTGGTATCTTGAAGGGATACGTCGGACTGAGCGGCGCCATAATCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCACTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACCAAAAGAACCATCTTGTTGGACAACAATTGTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTACTCTCTGCAATTTGCGGCGTCGGAGGAACATTAACGATGATCGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAGAAGCATTAGCACATTTGTAACATTAATCAGCATTTGGAATTACCTCGGTCGAGTTGCCTCTGGTTTCGTCTCTGAAATCGTTTTGACAAAATACAAATTCCCTCGTCCTTTAATGTACTCTTTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTTCCAAATGGGCTTTATGTGGCTTCCGTCGTAATCGGATTTTGTTTTGGAGCACAGTGGCCATTGATTTTCGCAATAATTTCCGAACTTTTTGGATTGAAATATTACTCAACGCTTTTCAATCTTGGGTCAGTGGCGAGCCCAATTGGACTTTATGTTCTGAATGTGAAAGTGGCTGGAAATTTCTACGATAGAGAGGCAGAGAAACAGCTCAGAGCAAAAGGGATGATTAGAAAAGCAGGGGAAGAATTAAAGTGCCTTGGAAGGGAATGCTTTAAGATTTCGTTCATTGTAATTACTGCAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGAACGAGGAGTTTCTACAAGAGTGATCTTTATAAGAAGTTTCGAGATGAAGCTAAAACAGAGGTGGCCGGAAATGGGGCTGTGGCGGCGACCGAAGCAGCGGAAGAGACGAGAAAATGA 1668 44.06 MVACRGISRCCNIWSIVVHVITGRWFTPNHGDSRNIVHDLGANVGILSGLINEVTPPWVVLSIGAVLDFFGYFMIWLAVTKRISAPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFTQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQPKEPSCWTTIVNPPARGEDFTILQALFSVDMLILLLSAICGVGGTLTMIDNLGQIGMSLGYPKRSISTFVTLISIWNYLGRVASGFVSEIVLTKYKFPRPLMYSLTLLFSCIGHLMIAFDVPNGLYVASVVIGFCFGAQWPLIFAIISELFGLKYYSTLFNLGSVASPIGLYVLNVKVAGNFYDREAEKQLRAKGMIRKAGEELKCLGRECFKISFIVITAVTLLGMFVSLILVIRTRSFYKSDLYKKFRDEAKTEVAGNGAVAATEAAEETRK 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31561976 31564365 + ClG42_05g0232100.10 Clacu05g2321 250068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2321 555 Pfam Nodulin-like 36 238 IPR010658 -
Clacu05g2321 555 Gene3D MFS general substrate transporter like domains 253 538 IPR036259 -
Clacu05g2321 555 CDD MFS_Mch1p_like 39 508 - -
Clacu05g2321 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 38 531 - GO:0016020(PANTHER)
Clacu05g2321 555 SUPERFAMILY MFS general substrate transporter 45 520 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2321 Clacu-Chr5:31561976 Clacu08g0930 Clacu-Chr8:19443626 2.80E-194 dispersed
Clacu05g2320 Clacu-Chr5:31550671 Clacu05g2321 Clacu-Chr5:31561976 6.70E-287 tandem
Clacu05g2321 Clacu-Chr5:31561976 Clacu05g2322 Clacu-Chr5:31572034 3.60E-181 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2321 - - - 0.0