Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu05g2379 | ATGGGGGTGCCTGCAACTGCAACTTTGGGGGATGATTTTCTGAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTCTTTCAGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAAACGAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCTATTGGTCAGTTAAGAAACATTATCAAATTCTTTAGTAGCCATAAAGGTTTTAAGAGTAGCGAGGTAGTGCTTAACCAGGCAAATACGCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCCGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGGAAAGAATCACTCCTCAAATCCACATTCTGCACATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCTCTCTCATACCACCACGTGTTCTACCACTGCTGCATGATTTATCACAGCAAATGGTTCAAGCTGGTCATCAACAACAAATTTTAAAAATCTACAGGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGGAAATTAGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGCGATCAAATATTTGAAGGCTTTGAATCACTTAGAGACCAATCATTTGCAGAGGTTACAAGTAGTAGTGTGTCTGTGCTATTCAGTTTCGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATTATGCGAGAGCTTCACTCCGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAATGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCTCAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAACTTTTTCAAGAATTTGAAGATAGTGGTCAAACGAATTCGGAATTGGCCACCGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCATTACAGAGACCCTGCTTTGACTCACTTATTCCTCATGAACAACATTCACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTAGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGTGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAAGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACTGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTTGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTATGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTCGAAGGGAAGAACTTGAGTGAACCTAAGCGTCATTGGTCCAAGTTGCTCCCTGTTTCTGGAGGTCCAAAATCTGAGGGTTTGTACATATTATTTGTAATAGGCTCACGCTCGATGTCCTTGAAGAGGAATCCTGTCTTGCGAATCAAAGCCAAAAAAGATGACACGCTGCGCGCCATTGAAGACTACCAAAATGAAGTTGTGGACGCAAAGGCTTCCGGCTTTGCTTCGCTGCCGAGAAAATTGGACCATTCTCGAAGAATCAAACTCGCTCCGGTAATCATCAACTTCTTTCTTCTTCGTCTCACTCATCTGCATATTTGTTTAATCATTCTCTTCTCTTTACTTTATCTGGAACAATCTGGAAATTCCTTCTATACTAGGCTTCCTTCCTTACTGTTCCTAGAAATGCCGGGAGATGGTGGAATCACTGCGGATCCAACCATCGAAGCCTGCAGCAAGGAGGCAAGCGACTCCAAATTCGCGAAGCGTTTTGCCGACGATATCATGCCTCACGTCCTCAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCATTAACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTTTGTCCAAGGTCTTTAGTGAATCCAGAATTGTGGAATACAATGTCAAAGAAAAACTTATTTCTCCTGGAAAACACGAGATTATAGTCGATAATAAGCAACACTACAAGTTTATCGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAACAGAGAAACAGTCCAGTTACCAATGGTTGGTCGAATTATAGAAATGACTCGCAGATTTACAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAA | 2883 | 42.18 | MGVPATATLGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANTLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGGKNHSSNPHSAHHDNSLETAVYTPPSLIPPRVLPLLHDLSQQMVQAGHQQQILKIYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIKESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKRHWSKLLPVSGGPKSEGLYILFVIGSRSMSLKRNPVLRIKAKKDDTLRAIEDYQNEVVDAKASGFASLPRKLDHSRRIKLAPVIINFFLLRLTHLHICLIILFSLLYLEQSGNSFYTRLPSLLFLEMPGDGGITADPTIEACSKEASDSKFAKRFADDIMPHVLNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFIGRNIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRIIEMTRRFTMLATHAMMGFGKD | 960 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 32132059 | 32144146 | - | ClG42_05g0237900.10 | Clacu05g2379 | 250126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu05g2379 | 960 | MobiDBLite | consensus disorder prediction | 173 | 201 | - | - | |
Clacu05g2379 | 960 | Pfam | Exo70 exocyst complex subunit C-terminal | 281 | 640 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Clacu05g2379 | 960 | Gene3D | Exocyst complex component Exo70 | 78 | 653 | - | - | |
Clacu05g2379 | 960 | Pfam | Exocyst complex component Exo70 N-terminal | 73 | 155 | - | - | |
Clacu05g2379 | 960 | SUPERFAMILY | Cullin repeat-like | 80 | 644 | IPR016159 | - | |
Clacu05g2379 | 960 | Coils | Coil | 688 | 715 | - | - | |
Clacu05g2379 | 960 | MobiDBLite | consensus disorder prediction | 171 | 201 | - | - | |
Clacu05g2379 | 960 | FunFam | Exocyst subunit Exo70 family protein | 88 | 651 | - | - | |
Clacu05g2379 | 960 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 17 | 646 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Clacu05g2379 | 960 | SUPERFAMILY | NTF2-like | 810 | 926 | IPR032710 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g1567 | Clacu-Chr1:27776658 | Clacu05g2379 | Clacu-Chr5:32132059 | 2.60E-276 | dispersed | |
Clacu04g0899 | Clacu-Chr4:23330430 | Clacu05g2379 | Clacu-Chr5:32132059 | 4.70E-46 | dispersed | |
Clacu05g2379 | Clacu-Chr5:32132059 | Clacu07g1457 | Clacu-Chr7:29227190 | 9.50E-105 | dispersed | |
Clacu05g2379 | Clacu-Chr5:32132059 | Clacu02g2122 | Clacu-Chr2:34369728 | 3.40E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu05g2379 | K07195 | - | csv:101206262 | 1219.53 |