Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2484 ATGAGGACAACAAGAATGCCTACCATTAACCTAGATCAAATTCCAAGTTTTGAAGAACATGGTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTGATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAGATAGTTCCCTGTGTCTCTAATGCATTGCCGCCAGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAGCTGAACAACCTTTGGGCTCGTTTCTATGTTCCAACACAGTGCCAGGAGAAGCTGCCTCTGATTGTATATTTCCATGGAGGTGGGTTTTGTGTTGGCTCGGCTGCTTGGAGTTGCTACCATGAGTTCCTGGCGAAGCTTTCTGCAAAAGCCGACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCAGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGCCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGCGGCAACATAGCCTTCAATGTAGCCGCCAGACTTGGTGGTAAGATGACTGCTACTGGAGCTGTGGTCTTGAAACCGTTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGCGGAGAGTCAAGGACCAAGTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCGCCACTGACGCTGGCGGTTTCTGATACGTACTGGCGGTTGGCGTTGCCTTCCGGGACAAACCGTGATCACGCATGGTGCAATCCTTCGGCAAAAGGATTGTTTAAGGTGGAGGATTTGAGGGTTTTGCCTAGTTTGATATGTATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGGGCGGGTAAGCTGATCAATTATGTGGTTTATGAAGGAGTTGGGCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGATTGATCATATCAAGGATTTCTTGTGTGTATAA 1056 44.79 MRTTRMPTINLDQIPSFEEHGNGFDQHDVLVEEIEGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKLNNLWARFYVPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKADCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGAKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARLGGKMTATGAVVLKPLVIKGSILIQPFFGGESRTKSEKFLVQPPRSPLTLAVSDTYWRLALPSGTNRDHAWCNPSAKGLFKVEDLRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMIDHIKDFLCV 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32966818 32967873 - ClG42_05g0248400.10 Clacu05g2484 250231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2484 351 Pfam alpha/beta hydrolase fold 95 326 IPR013094 GO:0016787(InterPro)
Clacu05g2484 351 Gene3D alpha/beta hydrolase 37 350 IPR029058 -
Clacu05g2484 351 PANTHER ARYLACETAMIDE DEACETYLASE 36 335 IPR050466 -
Clacu05g2484 351 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 177 189 IPR033140 -
Clacu05g2484 351 SUPERFAMILY alpha/beta-Hydrolases 29 349 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2484 Clacu-Chr5:32966818 Clacu07g1629 Clacu-Chr7:30874429 5.40E-106 dispersed
Clacu05g2484 Clacu-Chr5:32966818 Clacu08g1729 Clacu-Chr8:26790003 1.80E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2484 - - - 0.0