Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2511 ATGCGATCGCCTCAGATCCTACCTATCACCCAGCCCCCTTCGTTGTCTCCATTTTCCTCCGGGGGCTCCGCCGCAAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGACGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCCAGTTCCTCCTCAGGAAGCTGTATGTACAAGCAGAAGCGGAGGCGAGTTAAGAGCGAAGACCTTTTGTCCTTTCTCTCCGGTGATGTCCGCCACCAGACTGTTGATCATGATGTCGAGAATGTCGATGTTGAGAGAGCTGAGAGATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCGAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGACCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTATGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATCAGATGTTTGAAGATCTTGTTGCGATCATCCATGCCAATGATGCAGAAGCATTGGCGAAAGATGCGGTGGCACCTCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 43.68 MRSPQILPITQPPSLSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQTTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSCMYKQKRRRVKSEDLLSFLSGDVRHQTVDHDVENVDVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGPAVSILPPIILFHGTADYSIPSDASKTFAEALQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33204319 33207525 - ClG42_05g0251100.10 Clacu05g2511 250258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2511 479 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 118 445 IPR050300 GO:0016298(PANTHER)
Clacu05g2511 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Clacu05g2511 479 Pfam BD-FAE 193 403 IPR049492 -
Clacu05g2511 479 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 174 428 - -
Clacu05g2511 479 SUPERFAMILY alpha/beta-Hydrolases 181 445 IPR029058 -
Clacu05g2511 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Clacu05g2511 479 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1347 Clacu-Chr5:14410964 Clacu05g2511 Clacu-Chr5:33204319 2.30E-135 dispersed
Clacu05g2511 Clacu-Chr5:33204319 Clacu06g0878 Clacu-Chr6:11214824 3.30E-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2511 K15889 - csv:101206426 882.093