Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2515 ATGAGCCGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTCTGTAACGAACCAGAGTGTTTTGAGGCAGAAATTCGTAACTACATAGACAATCATATTAGTACAACCAAGTATACTCTAGCTACTTTCCTCCCTAAGTCTTTGTTTGAGCAATTCAGGAGGGTGGCCAATTTCTATTTTTTAGTCAGTGGGATCCTTGCTTTTACTCCTCTTGCTCCTTACACGGCTGTTAGCGCGATTATCCCTCTTATTCTTGTCATTTCAGCGACAATGATCAAAGAAGGGATTGAGGATTGGAGGCGGAAGAAACAGGATATTGAGGTTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTGCTTATACAGAGTGGAAGAATCTGAGAGTGGGTAATATTGTGAGAGTGGAGAAGGATGAATTCTTTCCAGCAGATATTATCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACAATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGAGGTGACTTCGCATATGCATGAGGATTCTATGTTCAACAGCTTTAAGGCTATCATAAAATGCGAGGATCCAAATGCAAATTTGTACAGTTTTGTTGGTAGTATGGAGTTGGAAGAGCAACAATATCCTCTGTCTCCTCAACAACTACTCCTTCGAGACTCTAAACTCCGGAATACAGATTATATATATGGGGTGGTTGTCTTTACTGGTCGTGACACAAAGGTTATTCAAAATTCTACGGATCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAAATGGATAAGATTATATATATTTTGTTCTGTCTTCTATTTTTGCTTGCTCTTGTAGGATCTATATTTTTTGGCCTTGTGACTGACGAGGATTTGGAAAATGGAAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCAAAATTTTCTTTGATCCAAAAAGGGCTCCAATAGCTGCAATATTTCATTTTCTTACGGCACTGATGTTATATAATTACTTCATTCCAATCTCACTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAGGCTGATAAACCTGCTCGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACAATACTCTCTGACAAGACTGGAACTCTGACCTGTAATTCAATGGAGTTCATTAAGTGTTCTGTGGCAGGGAGGGCTTATGGACGGGGTTTCACGGAGGTAGAAAGGACTATAGGTAGACAAAAGGATTCACCCCTGCATGAAGCTGTAAATGGGAGAAATCACCATGAGGATGCCAATGATAAAACTTCACATATCAAGGGCTTTAATTTTAAGGATGATAGGATTATGAATGGGAACTGGGTTAACGAGCCTCATGCAAATGTAATTCAAATGTTTTTCCGTCTTCTTGCAACTTGTCATACGGCAATACCTGAAATCAATGAGGACACTGGAGAGGTTTCTTACGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCTAGAGAACTCGGCTTTGAATTCTACAAAAGAACACAGACAAGCATATCACTGCACGAGTTTGATCCTTCCTTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTCTGGAGTTTAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAGATGAAGAGGATAAAATATTATTATTCTGTAAAGGTGCAGACAGTATCATGTTTGAAAGACTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAAGAACATGTCAATGAGTATGCTGATGCTGGATTGCGGACTTTGATACTTGCCTATCGTGAGCTTGAAGAGGAAGAATACAGAGAATTTGATGACAAGTTCACTAAGGCCAAAAGTTCAGTTAGTGCAGATCGAGAATCACTGATTGAGAAAGTAACTGACAACATTGAGAGGAATTTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAATGCATTGACAGGCTTGCTCAGGCGGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACTGCCATTAATATTGGTTTTGCCTGTAGCTTACTAAGACAAGATATGAAGCAGATTGTTATTACCCTGGAGACATCAGAAATTAAGGCGCTAGAAAAGACAGGGGATAAGGCTTCTATCACCAAGGCATCAATGCAATGCGTCCTCGATCAAATTACTCAAGGGAGAGCTCAGATCACTTCACCAAATGGGTTATCTGAAGCATTTGCATTAATTATTGATGGAAAATCACTTTCTTATGCTTTAGAGGACAGTATGAAGGCATTGTTTCTTGAGGTAGCAACACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACAAGGTTAGTTAAATCTGGAACACGGAAAACAACTTTAGCTATTGGCGATGGTGCCAATGATGTAGGGATGCTTCAAGAAGCGGACATTGGAGTCGGAATTAGTGGTGCGGAAGGAATGCAGGCCGTTATGTCAAGTGATGTTGCAATTGCACAGTTTAAATATTTAGAGCGCCTGCTTCTTGTGCATGGTCATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCCTATACGAAGCATTCACATCATTCTCTGGGCAACCTGTATATAATGATTGGTTTTTATCGCTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGATGTATCTGCAAGACTCTGTCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAGAATGTTCTTTTCAGCTGGCTCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCCGTGATCATTTTCTTCATTTGCACTAGAGCACTCGAGCATCAGGCATTCAACTCCGATGGGAAAACTGCAGGGCGGGATATTTTGGGTGCAACAATGTACTCTTGTGTTGTTTGGGTTGTGAACTTGCAAATGGCGCTCGCTGTTAGTTACTTCACCTTGATACAGCATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATCTATGGGTCCATGACCCCCACCTTTTCAACCAATGCTTACCATATTTTCATCGAAGTCCTTGCCCCTGGTCCTTCCTACTGGTTTGTGCTTCTGTTTGTGGTGATCACAACACTCATTCCTTACTTCTCCTACTCAGCTATACAGATGAGGTTCCTTCCCATGTATCATCAAATGATTTTATGGATTAGAAATGAAGGGCAACTAGACAACCAAGAGTACTGTGATATTTTCCGGAACACTTCCACTTTCCGATCAACGAGCGTGGGTTCCACAGCACGAAAGGGGAATGAACTCGATCTACGCAAATGTAAGGCCGAGAAAATCCGCGGCGGATTTGGCCATCACGGTGGTGAATTCGTTGAAGCTAATTACGCCGTCGCCGTCGGTATCGGCCTGTCGCATCATCTCGGAGAGTTCGCGGTAGGTCAGAGGATGGCCCATCTTCGCCATGGAACCAGCGAGCTCCGCAGCGGTGATGTAGCCATTGCCATCGCGATCGAAAGATCTGAAAACCTCCAACAACTGCTCTTGATTGACGAGAATATCGTCGTTCATGTCGGGGAGAATGGCATTGACGAGTTCATCGAATTCTATAGAGCCGTTGCCGTTGGAATCCATGTTGGAGAGGAGAGAATGGAGTTGGTCGCCGGAGGGTTTGATGCCGAGGGAGCGGAGAAGGGCGCCGAGCTCGAGCTGCGTGAGGCTGCCGTCGGAGTTCATGTCGAAACGCCTGAAAATGTCGTGCAGCTGCTTGAGCTGCGGGTCGGATTGAATGGAAGCCATGGATTTGGTTCTTCAGACGATTCGACAAGATCCGCAAGGAGGAGTTCGTCGAAGTTGGGGGATTTGGAAAATGGGGAGATTGGTCAGTTAGGGATGTGA 4143 42.55 MSRGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAEIRNYIDNHISTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAIIPLILVISATMIKEGIEDWRRKKQDIEVNNRKVKVHQGDGVFAYTEWKNLRVGNIVRVEKDEFFPADIILLSSSYEDAICYVETMNLDGETNLKLKQALEVTSHMHEDSMFNSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYILFCLLFLLALVGSIFFGLVTDEDLENGRMKRWYLRPDDAKIFFDPKRAPIAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGFTEVERTIGRQKDSPLHEAVNGRNHHEDANDKTSHIKGFNFKDDRIMNGNWVNEPHANVIQMFFRLLATCHTAIPEINEDTGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRDEEDKILLFCKGADSIMFERLGKNGREFEEETKEHVNEYADAGLRTLILAYRELEEEEYREFDDKFTKAKSSVSADRESLIEKVTDNIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIKALEKTGDKASITKASMQCVLDQITQGRAQITSPNGLSEAFALIIDGKSLSYALEDSMKALFLEVATHCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPVYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWLRILSWMFNGLCSAVIIFFICTRALEHQAFNSDGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYHIFIEVLAPGPSYWFVLLFVVITTLIPYFSYSAIQMRFLPMYHQMILWIRNEGQLDNQEYCDIFRNTSTFRSTSVGSTARKGNELDLRKCKAEKIRGGFGHHGGEFVEANYAVAVGIGLSHHLGEFAVGQRMAHLRHGTSELRSGDVAIAIAIERSENLQQLLLIDENIVVHVGENGIDEFIEFYRAVAVGIHVGEERMELVAGGFDAEGAEKGAELELREAAVGVHVETPENVVQLLELRVGLNGSHGFGSSDDSTRSARRSSSKLGDLENGEIGQLGM 1380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33258268 33267511 + ClG42_05g0251500.10 Clacu05g2515 250262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2515 1380 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Clacu05g2515 1380 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Clacu05g2515 1380 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Clacu05g2515 1380 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
Clacu05g2515 1380 FunFam Phospholipid-transporting ATPase 698 902 - -
Clacu05g2515 1380 SUPERFAMILY HAD-like 419 917 IPR036412 -
Clacu05g2515 1380 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1140 IPR023298 -
Clacu05g2515 1380 Gene3D - 544 697 IPR023299 GO:0000166(InterPro)
Clacu05g2515 1380 Gene3D - 115 286 - -
Clacu05g2515 1380 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1144 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Clacu05g2515 1380 FunFam Phospholipid-transporting ATPase 540 698 - -
Clacu05g2515 1380 FunFam Phospholipid-transporting ATPase 116 286 - -
Clacu05g2515 1380 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Clacu05g2515 1380 NCBIfam HAD-IC family P-type ATPase 830 944 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Clacu05g2515 1380 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Clacu05g2515 1380 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 699 IPR023299 GO:0000166(InterPro)
Clacu05g2515 1380 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Clacu05g2515 1380 Pfam Cation transport ATPase (P-type) 520 624 - -
Clacu05g2515 1380 SFLD p-type atpase 408 913 IPR044492 -
Clacu05g2515 1380 MobiDBLite consensus disorder prediction 1349 1380 - -
Clacu05g2515 1380 SFLD C1.7: P-type atpase like 408 913 - -
Clacu05g2515 1380 Gene3D - 698 902 IPR023214 -
Clacu05g2515 1380 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2515 Clacu-Chr5:33258268 Clacu05g2684 Clacu-Chr5:34421051 2.10E-278 dispersed
Clacu06g0874 Clacu-Chr6:11039642 Clacu05g2515 Clacu-Chr5:33258268 0.00E+00 transposed
Clacu09g0081 Clacu-Chr9:755600 Clacu05g2515 Clacu-Chr5:33258268 0.00E+00 transposed
Clacu04g1201 Clacu-Chr4:26177087 Clacu05g2515 Clacu-Chr5:33258268 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2515 K01530 - csv:101207148 2217.96