Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2563 ATGTGTGGAATCGCTTTGATCGTTTCTGGCATTCGCCTTGATTTATCATCTCTACATGTAGACGCCAGATCCCCGTTTCCTCATCCAGTTCACGAGCAACTTGAGTTTTCGATAGATGATCTTAAAGCGGCATTACGGAGAAGAGGGCCCGATAGCTTAGGCGGAGTGAAGGTTTTTATTTCTTCAAAATCTTCTAATCCCGGTGAAGAGCAGCAGTTTGAGTGTTTCATTGAGAGGGTTGATGATGGCGTTGCATTCCAGAGTCAAAATGATCAATACGAGATGGAAAATGGCCGGTTCTGTTCTGAAAATGGATGTATTCTCCAATCAGAGAACAGTTGCAGTAGGCCCATCTCTGGTGCGGAGTTTTATTTACTAGGGGCTACGTTGCAGCTTAGAGGGCTTAACCCTATTGTTCAGCCACTGAGGGATGCTTCCCGCAATATTCTTGTTTACAATGGTGAAATATTTGGTGGAATACACGTTGAGTGTCATGAAAACGATGCTGAAACTCTTATGCTAGCTCTTGGGAATTGTTGCGCATGTAATTTTAGTTTAGATATGAACACATGTGGAGGTGAATGTAAGAGAGAAAGAACTGTTGTAGATATTCTTTCAAAGATTCAAGGGCCTTGGTCAATCATCTACTGGCAGGATAGTGCAAAAACTTTGTGGTTTGGTCGGGATGCCTTTGGTAGGAGAAGTCTTCTTGTTCACTGGCCAACAGTGGAGGATTCTCGATTTCTGTTGTCTTCTGTATCACCAGCTTCTTCCACGTTTCACGGCTCAGGGCTTGAAGATGACGATGGTACTTGTGAAGTGAGCTTCTGGGAAGAACTACCATGTGGGATTTACAGCATCTCTTTTGATGCGCTGAGAACTGATGGTTACCTGATTGGTGAAGTCAAAAGCCATGAATGGACCAATGAATCCTTGAAAGAGCTTGTCGAGTGGAAAAGAACTCGTATTGTACCTGAACCTGGAGACATCTCCACTCCATATCACAAGGATCTTTTGTCACAACATCAAAGCCATTCAGCATGTTTACCTAACTTGCAATCAGTATCTGGGAGTATTCAAGCTCCTGTCTCAACTCCTGCAGAGATTCTGCTGGATGCTCTAAGGAAGTCTCTAATCCGGCGGACTTCACTTTATACAATTTTCAAGGGTACAATATCGGCTTCCAGAAAAGCAGAACTTGGTCCAGTGGCCATTCTTTTTTCTGGGGGATTGGATTCTATGATACTAGCAGCATTACTGGATGAATGTCTCGATACCTGCTATGAGATAGATCTTCTTAATGTCAGTTTTGATGGTTGTTCTGCACCTGATCGAATCTCTGCGAAGGCTGGAGTTAAGGAACTGAGTAGAATTGCCCCTCTAAGAAGGTGGAAGCTGGTTGAGATTGATGCTGACTTGTCAAATTTGACCTCTGAAACCAAGCACGTCATGTCGCTAATAAATCCTGCAAATACATACATGGACCTGAATATTGGAATAGCTTTGTGGCTGGCCTCTGGTGGCAATGGTTGGATTTATGAATCAATTGACAAGGATGAGAAGTTTCATCAACGTGTAAAATACAAGTCTGAGGCCAAGATTCTCCTTGTTGGTTCTGGTGCCGATGAGCAATGTGCTGGCTATGGTAGGCATCGAACAAAATATAGACAAGGGGGCTGGCATCTTTTAAATGAGGAAATGAAGTTGGATATTCAGAGAATCTGGAAGAGAAATCTAGGGAGAGATGACAGATGTATTGCAGATAATGGCAAGGAGGCTAGATTTCCCTTTTTGGATGAAGATGTTATACATACATTGCTAGCATTTCCTCTATGGGAGGTTACCGACCTTGAGAAACCTGCTGGGACCGGTGATAAGAAGATACTAAGGGAGGTTGCGAAACTACTTGGTCTGCATGAAGCAGGAGCTCTACCTAAAAGAGCAATACAGTTTGGCTCGAGGATTGCGAGGGAATCAAACCGCAAGAACTTTGGAAGCAACCGGGCTGCTAATCAGGCCTCAGCAGGAAGTGTGAAGTTCAACAGGCAATCCGTTCTTCAGTGA 2064 43.75 MCGIALIVSGIRLDLSSLHVDARSPFPHPVHEQLEFSIDDLKAALRRRGPDSLGGVKVFISSKSSNPGEEQQFECFIERVDDGVAFQSQNDQYEMENGRFCSENGCILQSENSCSRPISGAEFYLLGATLQLRGLNPIVQPLRDASRNILVYNGEIFGGIHVECHENDAETLMLALGNCCACNFSLDMNTCGGECKRERTVVDILSKIQGPWSIIYWQDSAKTLWFGRDAFGRRSLLVHWPTVEDSRFLLSSVSPASSTFHGSGLEDDDGTCEVSFWEELPCGIYSISFDALRTDGYLIGEVKSHEWTNESLKELVEWKRTRIVPEPGDISTPYHKDLLSQHQSHSACLPNLQSVSGSIQAPVSTPAEILLDALRKSLIRRTSLYTIFKGTISASRKAELGPVAILFSGGLDSMILAALLDECLDTCYEIDLLNVSFDGCSAPDRISAKAGVKELSRIAPLRRWKLVEIDADLSNLTSETKHVMSLINPANTYMDLNIGIALWLASGGNGWIYESIDKDEKFHQRVKYKSEAKILLVGSGADEQCAGYGRHRTKYRQGGWHLLNEEMKLDIQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIHTLLAFPLWEVTDLEKPAGTGDKKILREVAKLLGLHEAGALPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVKFNRQSVLQ 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33595114 33600548 - ClG42_05g0256300.10 Clacu05g2563 250310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2563 687 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 29 267 IPR029055 -
Clacu05g2563 687 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 41 256 IPR029055 -
Clacu05g2563 687 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 682 IPR051857 -
Clacu05g2563 687 Gene3D HUPs 364 683 IPR014729 -
Clacu05g2563 687 CDD Asn_Synthase_B_C 401 652 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Clacu05g2563 687 Pfam Glutamine amidotransferase domain 140 253 IPR017932 -
Clacu05g2563 687 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 396 673 - -
Clacu05g2563 687 Pfam Asparagine synthase 557 635 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2563 - - - 0.0