Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2568 ATGTATTTAGTGGAGAGTAAAGAAGGGGCTATAGCATGTATGGTATTGTCCCTCTTCTTTTTGGGAACCTTCCCTGCTCTTTTAAGTCTACTTGAACGGCGAGGGCGTCTTCCTCAGCATACTTTTCTTGATTACTCCATAACAAATTATTTAGCTGCTGTAATTTTTGCGCTGACACTTGGTCAGTTTGGAAATAGCTCACCAGATAGACCAAATTTTATCCAACAGCTTTCTCAGGTGCAGGATAATTGGGCTTCTGTTATATTTGCTATGGCTGGTGGTGCAGCGCTGAGTATTGGAAATCTTTCTTCTCAATATGCTTTGGCATTTGTTGGTTTGTCAGTTACAGAAGTGCTCAATTGTAGCATAATAGTAGTTTTAGGCTCAACCATGAACTATTTTCTTGATGGCAAAATTAATAGAGCGGAGATTCTTTTCCCCGGCATTGCTTGCTTTTTGATTGCGGTTTTTCTTGGCTCTGCTGTTCACTTATCCAACACAGCTGATGACAAAATAAAGTTGGAAAGCTTGTCCATCGATTCAAAAAAGGAGTCCAAGGCAATTGCTGTCTCTCCAATATCAGTTGAATCAGCGGACCTGGAGAATGCCGATTGTTCCTCGCGAAATGCAGAAGCTGGAACTGCAGACTTTCTTGTTCAAGTTGAAAGCAGAAGGTCCATCAAGGTGTCTGGTAAGAGCACACTAGTTGGACTGTGCATAATTTTCTTTGCTGGTGTTTCCCTTTCACTCTTCTCACCTGCATTCAATTTGGCTACAAATGATCAATGGCACACTCTAAAGGAAGGCATCCCACACTTGTCTGTCTATACTGCATTTTTCTACTTCTCGACCTCTTTTTTCGTCTTGGCCGTCGTTCTTAACATCATCCTCCTTTACCGCCCTATACTGAACTTACCCAAAACATCATTCAAGGCTTATCTGAATGATTGGGATGGTAGAGGATGGGCCTTTTTGGCTGGATTTTTGTGTGGATTTGGCAATGGTTTGGAGTTCATGGGTGGTCAAGCTGCTGGATATGCAGCAGCAGATTCTGTGGAGGCATTTCCACTGGTGAGCACAATTTGGGGTGTTGTTCTGTTTGGAGAATACCGAAGATCGTCAAGAAAAACTCACGTTCTGCTAGTGAGCATGTTGTTTATGTTCACAGTAGCTGTTGTTGTTCTAATGGCTTCATCGGGACATAGACTTGAGCCAGGTTGGCATCCTCAAGCAGATGTAGAACTCAACAATCAACACACAAGAAAGAAAAAGTTCAAATTGAAGCGAAAAAGGTACTTGATCTTACATGTTTTCTCATTGGAAGGAAACAATGAGGCTGATGAATATCACCTTTCTCTGCAGGATTTCTTTGCCATTTCATAA 1383 41.87 MYLVESKEGAIACMVLSLFFLGTFPALLSLLERRGRLPQHTFLDYSITNYLAAVIFALTLGQFGNSSPDRPNFIQQLSQVQDNWASVIFAMAGGAALSIGNLSSQYALAFVGLSVTEVLNCSIIVVLGSTMNYFLDGKINRAEILFPGIACFLIAVFLGSAVHLSNTADDKIKLESLSIDSKKESKAIAVSPISVESADLENADCSSRNAEAGTADFLVQVESRRSIKVSGKSTLVGLCIIFFAGVSLSLFSPAFNLATNDQWHTLKEGIPHLSVYTAFFYFSTSFFVLAVVLNIILLYRPILNLPKTSFKAYLNDWDGRGWAFLAGFLCGFGNGLEFMGGQAAGYAAADSVEAFPLVSTIWGVVLFGEYRRSSRKTHVLLVSMLFMFTVAVVVLMASSGHRLEPGWHPQADVELNNQHTRKKKFKLKRKRYLILHVFSLEGNNEADEYHLSLQDFFAIS 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33624418 33630078 - ClG42_05g0256800.10 Clacu05g2568 250315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2568 460 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 402 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0022857(InterPro)|GO:0071705(InterPro)
Clacu05g2568 460 Pfam Ureide permease 41 398 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2568 Clacu-Chr5:33624418 Clacu09g0872 Clacu-Chr9:8104271 8.40E-168 dispersed
Clacu05g2568 Clacu-Chr5:33624418 Clacu05g2570 Clacu-Chr5:33632583 5.00E-19 proximal
Clacu05g2567 Clacu-Chr5:33621538 Clacu05g2568 Clacu-Chr5:33624418 6.60E-169 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2568 - - - 0.0