Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2571 ATGGCTGTTTTCGTGTTCTTAGTGTTTGTTCTTGCGCTAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGCAACCCAACAAGCCCTTCAGAAGGCACTGGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCTCCAGTGGCGCTTGTTTTCAGCCCAACACTGTCAAAGATCACTGTAATTACGCTGTCAATAGTTATTTCCAGCGAAAGGGGCAAGTCCAAGGAAGCTGTGACTTTAATGGCGCCGCCACGCCCAGCGTTACCCTTACTGCCTCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCGGGAACATCGCCGACGAACTCCGGCGGAACCACACCGACGATGACACCAGGGACGCCGTCGACGACGAATCCAGGAATGACGCCGACGGTGTTCGGCAACGGAATCAGCCCGAGTGGGAGCGGCTCCGGTTTCAACGACGGCAGCGGCAGCGTGGGTTTCAATGAAAAGAGGAACTTGCTTTTGGCAGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTTCTCTGGGGATGA 570 53.86 MAVFVFLVFVLALTGRSYANYCLCRDGATQQALQKALDYACGAGADCSPILSSGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVTLTASVPSGCVYPSSPSNAGTSPTNSGGTTPTMTPGTPSTTNPGMTPTVFGNGISPSGSGSGFNDGSGSVGFNEKRNLLLAVGLTLWLSVLFLWG 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33637268 33638521 - ClG42_05g0257100.10 Clacu05g2571 250318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2571 189 SMART X8_cls 20 106 IPR012946 -
Clacu05g2571 189 Gene3D - 17 108 - -
Clacu05g2571 189 MobiDBLite consensus disorder prediction 109 156 - -
Clacu05g2571 189 Pfam X8 domain 21 91 IPR012946 -
Clacu05g2571 189 PANTHER BETA-1,3 GLUCANASE 10 109 IPR044788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g1244 Clacu-Chr4:26540882 Clacu05g2571 Clacu-Chr5:33637268 2.50E-29 wgd
Clacu05g2571 Clacu-Chr5:33637268 Clacu06g1672 Clacu-Chr6:27479020 2.50E-33 wgd
Clacu05g2571 Clacu-Chr5:33637268 Clacu08g1195 Clacu-Chr8:21901888 1.30E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2571 - - - 0.0