Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2607 ATGACGAGAGCTTTTAGAAGACGGACTTCGTATTCAAGGCCTACAGATCGCCTCCGATTCCAGGCATCGGCGGACGGTGCTACGAAATCTGGATTCATCAGAGATATGAAGCTGAAGGAGATCTTGACTACTTTGCTTATAGGCCTTCCCTTGGTTGTTTTTGTTGTTTTGGTTCTTAGGAATCCAGCGGTGGATCTCTCTCTGGGTTTTGCGGAAGCCAGAGCATTGGGAAGAGTGGCCACTAATGGCGGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTCGACTTTCCAATAGAGACAAACTTATTGGAGGTCTTCTCCTTCCTGGATTTGATGAAGGATCATGCTTAAGCAGATATCAATCCAGTTTATATCGAAGAACTTCAACCCACAAACCTTCTCCTTACCTCCTCTCGAAGCTTAGAGACTACGAAGCACTTCATCGACAGTGTGGTCCCCATACGAAACCATACGATGAAGCAGTAGAGCAACTCAGATCTGGCAGTAGTGTTAGTTTGTCAGAGTGTAAATATGTTGTGTGGATATCTTATAGTGGCTTGGGAAACAAGATACTCACTTTGGCTTCTGCATTTCTTTATGCCCTCCTTACCAATCGTGTCTTGCTTGTTGATCCAGGGAAGGATATGGCTGATCTATTTTGTGAGCCTTTCCCAGAAAAATCTTGGTTGCTACCAAATGACTTCCCCTTGGTGGATCAATTCAGCCATTTTGATTCGAAATTTCCTAATTGTCTTGGAAATATGCTTAAGATGAACACTCTAAACACGTCAACAGAATCACTCCCATCCTATCTATACCTACATTTGGTCCATGATTATGATGATCACGACAAGCTCTTCTTCTGTGATCAAGAACAGTCTCTTTTGGGCAGGATCCCTTGGCTAATACTGAAGACAGATAACTACTTTGTTCCATCTCTCTTCTTGATCCCATCGTTTGAGCACGAACTCAGTAACTTGTTCCCCCAAAAAGACACCGTCTTCCATCATCTGGGCCGGTATCTTTTCCACCCATCGAACCATGTTTGGGGACTAATAACGAGATACTACGAAGCATATCTATCAAGTGCTGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGTGAACCGGGGCCATTTGAACATATAATGGATCAGATTTTAGGCTGTACTCTTAAGGAGAAGTTACTGCCTGAGGTAGACAAGGAAGGCTTCTCTTCTGTTCCTTTGGAACGCCCAAGTGTAAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATATTATGAAAAATTGAGAAGCTTGTACTGGGAATACCCGACCACAAGTGGAGAGGTCATTGCAGTTTATCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAATAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGCGATGTGTTGGTGACCAGTGCATGGTCAACATTCGGGTATGTGGCTCAAGGACTCGGCGGATCGAAGCCATGGATTCTTTACAAGGCTGAGAACATGACCACGCCCGATCCACCATGTCGTAGGGCAATGTCAATGGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGAAGTTGTTCCACATGTAAGACATTGTGAAGACATGAACTGGGGGCTTAAGCTTGTTCACCATGAGGATTTATAA 1716 43.88 MTRAFRRRTSYSRPTDRLRFQASADGATKSGFIRDMKLKEILTTLLIGLPLVVFVVLVLRNPAVDLSLGFAEARALGRVATNGGSESSGSENGFSRLSNRDKLIGGLLLPGFDEGSCLSRYQSSLYRRTSTHKPSPYLLSKLRDYEALHRQCGPHTKPYDEAVEQLRSGSSVSLSECKYVVWISYSGLGNKILTLASAFLYALLTNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLVDQFSHFDSKFPNCLGNMLKMNTLNTSTESLPSYLYLHLVHDYDDHDKLFFCDQEQSLLGRIPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDTVFHHLGRYLFHPSNHVWGLITRYYEAYLSSADERIGIQVRVFESEPGPFEHIMDQILGCTLKEKLLPEVDKEGFSSVPLERPSVKAVLMTSLSSGYYEKLRSLYWEYPTTSGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGEVVPHVRHCEDMNWGLKLVHHEDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33872974 33875449 + ClG42_05g0260700.10 Clacu05g2607 250354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2607 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 40 568 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Clacu05g2607 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Clacu05g2607 571 Gene3D - 174 225 - -
Clacu05g2607 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 175 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1075 Clacu-Chr7:25306640 Clacu05g2607 Clacu-Chr5:33872974 3.60E-157 transposed
Clacu04g1271 Clacu-Chr4:26788639 Clacu05g2607 Clacu-Chr5:33872974 4.20E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2607 K13681 - csv:101216541 1048.88