Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2694 ATGGATTTGCTGCTTCACCTTCAGCTTCAACCATGGCAGCTTCATCTCTTCCTTTTCTTCCTTTCTGTTTCCCCTGTTTGTTATTGCCAACTCAGTCCCCCTCAAAATATCGAAACCTTCTACCCTTCCCCATTTATTCCTCAACCACCGTCGCCAATTTCGCCGTCGTCTTCACTTGACCATCCGCCGTCGTCCACGTCAACCAAGACCATCGCCACGGCGGTGGCTGTCACTGCAGTGGGTGTGGCTCTGCTTTCCACGTTGTTCTTCTTCTTAATACAGAGATATGTGATCGGAAGAAAACGAAAAACAGAGGAGGCAAATTCAGGGACCGGTCCGGGTTTGGTCTCGCAGCCGGCGGCTGCTCAGAATGAATTTTCACGTGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAGAAAGAAATCCAAGAATAGCTTTGATCGGAGTGACGGAGAAAGAAATGTTAAGGAAAATCGAAGCAAAAAGTCAGAGTCTGTTCAAGAAATTCCTCTACTTCGAGGAAAATCTTCAACTTCACATGTTAAAATTGCACCGGAAGATGAAGAATCCAGTCGGAATACATCTCCTCCGCCCCCTCCACCGCCCCAGATTAACAACCCTCCGCCATTTACTGGGAATTCTGATCAGTCAGTTGGAAAACCATCGAGTAGTTCAAATCTTTCATTAACAGCACCACCGCAACCGGCGGCAATTCCAGTACCTCCGTCACAATCTCTCATGGCTGTTCCCAACAATAAGAGCTCTGTTCCGCCACCGCCCCCACCGATTCCAGCAAAGACCAATTCAAGTCTGCCGCCGCCGCCACCTCCCATTCCGGCCAAGACCAATTCAAGACCGCCGCCACCACCTATTCAATCCAAGACCAATTCAGCAGCTCCACCTCCCCCTCCTATACCGGCCAAGGCAAATCCGGCAGCACCAGCGCCGCCACCGCCCAAGGCCGGCGGTTCAAAATTGCCCTTAAGGCCTGCACCTCAAAAAGAGGGTAATAAGTCCTCTAGAGAGGGTTCTTCATCAGCCGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAACCGGAAATCCCCACGGAGTGAAGCTAGTTCTACAGCAAACGCCGTTGGCCGAAACTCAGGGCCGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATAGCCATTGTGGTCAAGTCCTTGACTATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGACTCGAAACAGAGATTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAAAGGAGACCCCCAGCAGCTTGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTGCTCGTTTCAATGCCATGCTTTTCCGACTGAATTTCACTTCGGAGATTCTCCATCTCAAGGAATCTCTAGAAACTCTGGAGTCCGCCTGCAAGCAGCTTAGAACTCGAGGGCTGTTTTTAAAATTGCTTGAAGCAATTCTCAAAGCTGGGAATCGGCTAAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTACAGCTCTTCGGAAGCTCTCTGATGTTCGAAGCACTGATGGGAAAACCACTTTGCTTCACTTTGTAGTGCAAGAAGTGATCAGGGCAGAAGGGAAAAAGTGTGTTTTAAACAAGAACAAGAGCTTGAGCCGTAATAGCAGCCATAGCAGTGACAACAGCTTTAGCAGCTTCGAAAATTCGACTGCGAAGGAGGACAGAGTAAAGGAATATATGATGTTGGGACTGCCAGTTGTGGGAGGTCTAAGCGCTGAATTCTCTAATGTAAAGAAAGCGGCAGCGATTGACTTCGAGAGCTTCGTCAAGGCTGGGTCATCTCTGACTAGCCGAACCGCAGAAATCCGGCAGCTCTTAACTCAAATTGGGAACAACGAAGGTGGTTTTGCTAAAGAAATGAGAGGGTTTCTTGAGGCAGCAGAGAATGAGCTGAAGGTGGTGAGAGAAGAACAGACAAAAGTGATGGAGTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCAAAAGATAAAGAAGCAAATCGGCTTCAATTATTCATCATAGTAAAAGATTTCCTAGAAATGGTAGATCGGGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAGGAGATCATCGGGAGTAAATGTGGGTTCGGGTTCATCACCGGTGAGATCGAAGGCCATCTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATACAGATGATGAATTCTGA 2502 46.88 MDLLLHLQLQPWQLHLFLFFLSVSPVCYCQLSPPQNIETFYPSPFIPQPPSPISPSSSLDHPPSSTSTKTIATAVAVTAVGVALLSTLFFFLIQRYVIGRKRKTEEANSGTGPGLVSQPAAAQNEFSRVDGNLKGFIVDENGLDVIYWKRLERKKSKNSFDRSDGERNVKENRSKKSESVQEIPLLRGKSSTSHVKIAPEDEESSRNTSPPPPPPPQINNPPPFTGNSDQSVGKPSSSSNLSLTAPPQPAAIPVPPSQSLMAVPNNKSSVPPPPPPIPAKTNSSLPPPPPPIPAKTNSRPPPPPIQSKTNSAAPPPPPIPAKANPAAPAPPPPKAGGSKLPLRPAPQKEGNKSSREGSSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSTANAVGRNSGPSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQQLADAESFLYHLLKSVPSAFARFNAMLFRLNFTSEILHLKESLETLESACKQLRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKKCVLNKNKSLSRNSSHSSDNSFSSFENSTAKEDRVKEYMMLGLPVVGGLSAEFSNVKKAAAIDFESFVKAGSSLTSRTAEIRQLLTQIGNNEGGFAKEMRGFLEAAENELKVVREEQTKVMELVMKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEITRDLQRRRSSGVNVGSGSSPVRSKAIFHNLPENFMSDKSRGSSSDTDDEF 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34513705 34516287 - ClG42_05g0269400.10 Clacu05g2694 250441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2694 833 MobiDBLite consensus disorder prediction 267 339 - -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 223 246 - -
Clacu05g2694 833 SUPERFAMILY Formin homology 2 domain (FH2 domain) 434 789 - -
Clacu05g2694 833 Gene3D Formin, FH2 domain 378 794 IPR042201 -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 156 182 - -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 413 437 - -
Clacu05g2694 833 Coils Coil 536 556 - -
Clacu05g2694 833 ProSiteProfiles Formin homology-2 (FH2) domain profile. 358 802 IPR015425 -
Clacu05g2694 833 Coils Coil 715 742 - -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 414 437 - -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 351 365 - -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 206 222 - -
Clacu05g2694 833 SMART it6_source 358 791 IPR015425 -
Clacu05g2694 833 PANTHER FORMIN-RELATED 32 831 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Clacu05g2694 833 Pfam Formin Homology 2 Domain 361 776 IPR015425 -
Clacu05g2694 833 MobiDBLite consensus disorder prediction 156 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2694 Clacu-Chr5:34513705 Clacu08g1041 Clacu-Chr8:20438740 7.50E-114 dispersed
Clacu05g2694 Clacu-Chr5:34513705 Clacu05g1644 Clacu-Chr5:24451291 2.00E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2694 K28090 - csv:101208197 1188.33