Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2711 ATGGAAGTTAAGGGAGAAAGAATATTGGGAATAATGGTTCCATTTTTGGCGATGGTGAGCTTAGAAGGTTGCACTATTGCATTAACAATATTGGCTAAAACAGCCATTACTTATGGAATCTCCACTTTCGTTTTTGTTGTGTATACAAACGCCGTTGCTTCCATCATTCTTCTTCCTTATTCCTTCATCTTTCATTACAACCACAGAATGGAATATCAACAATCTTTGTTTTCATTCCCTCTTCTCCTCCGAGTCTTCCTCTTGGGTTTCACAGGGATATGTATATCTCAGAACTTAGCATTTTTGGGCCTAAGTTACAGCTCTCCAATTGTGGTATGCGCAATGGGTCTTATGCTTCCAGCCATTTCCTTCGTACTCTCAATCCTTCTCGGGAGGACAAAAATTGAGTGGAAAAACCCCAACTTTATTACAAAACTAGTTGGGACAGTTATATCAGTTATAGGAGCTACATGTGAAGAGCTTTACCTAGGCCCAGTTGTACGGCAACATCCATCATTTTCTACTACTACACATTTACAGTTCAAACAGAAGCTTTTGGTGTTTACTTCAACCACAGATCGTTGGATTTTGGGTGGCCTTTTATTAGTAGCTGCTACTTTATGTGTCTCAATATGGAACATTATTCAGTTGGGAGTTGTAAAACAGTACTCGCAAGTGATGAAAGTTGCCTCTTTTTATAGTATAGTGGGCACGTTACTCTCAACAATTGTGGGTTACTTTGTTGTCAATGATCCAAGTGCTTGGACAATCAACTCTAGCTTCGACCTCATTCTCATTATTGCAACGGGAACTTTTAGCGGTTTGATTCGAAACCGAGTGCAAATATGGTGCATGCAAAAGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCCACCTTCTTTGGCGTCACTTTCTTTGGCGACACCTTTCATTACGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGGTATTTGACAGTAATGTGGGGGCAAATTAACGAAGATCGTGGAGTAGGAGAAGACAAAGATGGTGACAAGAATAATGATGATTTGTCTTCAGCTAAAGTTCCACTTCTTGATGAAGAATCACAAGTGTAA 1119 40.13 MEVKGERILGIMVPFLAMVSLEGCTIALTILAKTAITYGISTFVFVVYTNAVASIILLPYSFIFHYNHRMEYQQSLFSFPLLLRVFLLGFTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFVLSILLGRTKIEWKNPNFITKLVGTVISVIGATCEELYLGPVVRQHPSFSTTTHLQFKQKLLVFTSTTDRWILGGLLLVAATLCVSIWNIIQLGVVKQYSQVMKVASFYSIVGTLLSTIVGYFVVNDPSAWTINSSFDLILIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGILFATFFGVTFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDRGVGEDKDGDKNNDDLSSAKVPLLDEESQV 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34646411 34649005 - ClG42_05g0271100.10 Clacu05g2711 250458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2711 372 PANTHER WAT1-RELATED PROTEIN 16 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Clacu05g2711 372 MobiDBLite consensus disorder prediction 345 372 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2711 Clacu-Chr5:34646411 Clacu09g1924 Clacu-Chr9:34129247 7.60E-42 dispersed
Clacu05g2711 Clacu-Chr5:34646411 Clacu09g1923 Clacu-Chr9:34115303 2.50E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2711 - - - 0.0