Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2793 | ATGATGCATAGCATTTCCATCTGGGTGGTTTCTGTATTCTTGCTGTTGGTTTTGTCTTTCCTACTGCTTATTAAAACAAAGACACACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTCTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCTCATCGCTCATTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTAAGACTCGGTTCTGTTCCAACCATCGTAATTTCCTCTGCTGCTGCCGCCAGAGAGGTGTTACAAGTGCATGATCTTGTTTGTTGTAGTCGACCTCTCTTAGCCGCTAGTGCAAGATTTTCATACAACTTCTTAGACATAGGTTTATCTCCATATACTGATCATTGGAGAGAAGTTCGTAAGATTTCTGTTCTTGAGCTCTTCAACGCTCGGCGAGTGCAGTCGTTTCACTTGATCAGAGAAGAAGTCAGTCTGCTGTTAAAGACAATCGCTCAAGCTTCATCTCTTGCAATTCCAGTTGATCTGAGTGAGGAATCATATACTCTCACTGCAAATATGATCACACGCATAGCTTTTGGGAAGAGGTTTGGAGGGGGTGAACTAGATAATGGAAATTTTCAGCAGCTTATCCGTAGAGCAATAGCAGCATTAGGAAGCTTCTCCATGACTGACTTCTTTCCTAGTGTGGGTTGGATTATTGATCGACTCAGTGGCGTTAACGGGAGGCTGGAGAAGAGCTTTGCTGAGCTGGATGCTTTTTTCCGACAAGTAGTCGAAGGGACTTCTCAGAATGAAGAAAATATTGTCGATGTTTTGTTGGAAATGGAGAGAGATCACTCTGAACTTGATGATGCCTTACAACTAACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGAGCAGGCACCATTATTTGGGTAATGGCAGAGCTAGTTAAGAATCCAAAGGTAACGAAGAAGCTACAACATGAGATCAGAAGCTACATAAAAGAAGATCTGGTAAAGGAGAACGACCTTGAAAAACTTCAATATCTAAAAATGGTGGTGAAAGAGGTTCTAAGGTTACATCCGCCTGCCCCACTTCTACTCCCAAGAGAAACCATGACTCATTTTAAGCTCAAGGGTTACGATATTGATCCCAAAACTCATCTTCATATCAATGTATGGGCGATCGGGCGAGATCCAAATTATTGGACTTGTCCAGAAGAATTCTTACCCGAGAGATTTATGGGAAGCAATATGGGAAGCAATATTGATTACAAAGGGCAGAATTTCGAGTTATTACCATTTGGAGCTGGTCGAAGAATATGTCCTGGTATGAACATGGGGATTGTCACGATGGAGTTGGCTTTGGCTAATCTATTGCTACAATTTAACTGGAAATTGCCAGATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGCTGGTCTAACCATTGCAAAGAAATCACCTCTTAAACTCATCCCAATTGCTTATAGACCTTAA | 1503 | 42.18 | MMHSISIWVVSVFLLLVLSFLLLIKTKTHNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLRLGSVPTIVISSAAAAREVLQVHDLVCCSRPLLAASARFSYNFLDIGLSPYTDHWREVRKISVLELFNARRVQSFHLIREEVSLLLKTIAQASSLAIPVDLSEESYTLTANMITRIAFGKRFGGGELDNGNFQQLIRRAIAALGSFSMTDFFPSVGWIIDRLSGVNGRLEKSFAELDAFFRQVVEGTSQNEENIVDVLLEMERDHSELDDALQLTRDCIKAIIMDIFIAGVNPGAGTIIWVMAELVKNPKVTKKLQHEIRSYIKEDLVKENDLEKLQYLKMVVKEVLRLHPPAPLLLPRETMTHFKLKGYDIDPKTHLHINVWAIGRDPNYWTCPEEFLPERFMGSNMGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELALANLLLQFNWKLPDGMKEEDMDMEEDAGLTIAKKSPLKLIPIAYRP | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35283035 | 35284871 | - | ClG42_05g0279300.10 | Clacu05g2793 | 250540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2793 | 500 | FunFam | Cytochrome P450 83B1 | 21 | 494 | - | - | |
| Clacu05g2793 | 500 | SUPERFAMILY | Cytochrome P450 | 34 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 288 | 305 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 350 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | Pfam | Cytochrome P450 | 34 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | Gene3D | Cytochrome P450 | 22 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2793 | 500 | CDD | CYP71-like | 63 | 491 | - | - | |
| Clacu05g2793 | 500 | PANTHER | CYTOCHROME P450 71B11-RELATED | 9 | 496 | IPR050193 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g2793 | Clacu-Chr5:35283035 | Clacu05g2797 | Clacu-Chr5:35299089 | 7.50E-194 | dispersed | |
| Clacu05g2793 | Clacu-Chr5:35283035 | Clacu05g2794 | Clacu-Chr5:35287385 | 1.00E-195 | tandem | |
| Clacu05g2793 | Clacu-Chr5:35283035 | Clacu06g1849 | Clacu-Chr6:29002559 | 3.10E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2793 | - | - | - | 0.0 |