Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2794 | ATGATGATTTTGTTCATATGGATTCCATCTCTAATCTTCCTCTTGTCTTCTCTACTACTGTTTGTTAAAACAAAGACACACGAAAACAACAAGAAGATTTCCCTTCCTCCTCCAATCCCTCCAAAGCTTCCTTTCTTGGGTCATTTGCACCTCATTATTGCCTCTCTTCCCCATCGCTCTTTTCATAAGCTTTCAAAAAAATACGGTCCTGTAATGCTCCTTAAACTCGGCTCTGTTCCAACCATCATAGTCTCCTCCGCATCCGCTGCAAGACAACTATTCAAACTTCACGATCTTGCTTCTTGTAGCCGACCGCCTTTATCCGGTACTCGAAGATTGTCATACAACTATCTCGACATAAGCTTCTCTCCATATGGTCATCACTGGAGGGAAGTTCGAAAAATTTGTGTTCTTGAGTTGTTCAGTGCTAAACGAGTGCAGTCATTTCAAGGGATAAGAGAACAAGAGGTGGGTTTGTTGTTAAATTCCATCTCTCATTTTGCATCTACTGCCACTCCTGTTGATTTGAGTCAGAAATCGTATTCAATCACTGCCAATATAATAACTCGGATTGCTTTTGGGAAGAGCTTTCGAGGGGGTGAATTAGATAATGAGAATTTTCAATCAGTGGTTCGTAGAGCATTAGCGGTATTGGGAAGTTTCTCTGCCACTGATTTTTTTCCTAATGTTGGTTGGATTATTGATTGGGTTATTGGTGTTCGTGGAAGATTTGAAAAGAGCTTTGCTGAGTTGGATGCTTTTTTTCAACATGTAATTGATGATCGAATCAATAACTTTGTTGGGACAAGTTCGCAAAATGAAGGAAATGTTATTGTTGATGTTTTGTTGAAGATTGAGAGAGAACAATCTGAATTTGATTCTCTGCAGCTCACTACGGATTGCATCAAGGCACTTATCATGGACATATTTCTAGCCGGAGTTGACACAGGTGCAAGTGTCATTGTTTGGGCAATGGCAGAGCTAACTAAGAATCCAAAGGTGATGAAAAAGTTACAAGATGAAATTAGATACGCCATAAAAGAAGATCAAGTGAAAGAAAGTGAACTCGAAAAACTTGAATACCTTAAAATGGTGGTAAAAGAAGTTCTAAGATTACATGTGCCAGCCCCACTTCTCCTTCCTAGACAAACCATGTCACATTTCAAGCTTGATGGTTACGATATTGACCCCAAATCTCATCTCTATGTCAATGCTTGGGCAATTGCGCGAGACCCAAATTATTGGTTTAACCCAGAAGAATTCTTGCCGGAGAGATTTATGGGAAGTAATATAGATTACAGAGGACAAAATTTTGAGTTATTGCCGTTCGGAGCTGGTCGAAGAAGTTGTCCAGGGATGAACATGGCAATCGCTACGGTGGAGCTCACGTTGGCTAATTTATTGCTTCGTTTTGATTGGAAATTACCAGATGGAATGAAAGAAGATGACGTGAACATGGAAGAAGATGCTGGGCTAACTGTTACTAAGAAATCACCTCTTAAACTTGTTCCAATCAACTTCTCCAGAGTTTAG | 1533 | 39.92 | MMILFIWIPSLIFLLSSLLLFVKTKTHENNKKISLPPPIPPKLPFLGHLHLIIASLPHRSFHKLSKKYGPVMLLKLGSVPTIIVSSASAARQLFKLHDLASCSRPPLSGTRRLSYNYLDISFSPYGHHWREVRKICVLELFSAKRVQSFQGIREQEVGLLLNSISHFASTATPVDLSQKSYSITANIITRIAFGKSFRGGELDNENFQSVVRRALAVLGSFSATDFFPNVGWIIDWVIGVRGRFEKSFAELDAFFQHVIDDRINNFVGTSSQNEGNVIVDVLLKIEREQSEFDSLQLTTDCIKALIMDIFLAGVDTGASVIVWAMAELTKNPKVMKKLQDEIRYAIKEDQVKESELEKLEYLKMVVKEVLRLHVPAPLLLPRQTMSHFKLDGYDIDPKSHLYVNAWAIARDPNYWFNPEEFLPERFMGSNIDYRGQNFELLPFGAGRRSCPGMNMAIATVELTLANLLLRFDWKLPDGMKEDDVNMEEDAGLTVTKKSPLKLVPINFSRV | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35287385 | 35289410 | - | ClG42_05g0279400.10 | Clacu05g2794 | 250541 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2794 | 510 | SUPERFAMILY | Cytochrome P450 | 37 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | Gene3D | Cytochrome P450 | 20 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2794 | 510 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 505 | IPR050193 | - | |
| Clacu05g2794 | 510 | CDD | CYP71-like | 67 | 500 | - | - | |
| Clacu05g2794 | 510 | Pfam | Cytochrome P450 | 37 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2794 | 510 | FunFam | Cytochrome P450 83B1 | 21 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g2794 | Clacu-Chr5:35287385 | Clacu05g2800 | Clacu-Chr5:35345916 | 2.20E-201 | dispersed | |
| Clacu05g2793 | Clacu-Chr5:35283035 | Clacu05g2794 | Clacu-Chr5:35287385 | 1.00E-195 | tandem | |
| Clacu05g2794 | Clacu-Chr5:35287385 | Clacu05g2795 | Clacu-Chr5:35292742 | 9.10E-44 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2794 | - | - | - | 0.0 |