Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2797 | ATGCATTATTTCATTTGGGTTCCTCTTCTTTTTCTGTTAATTCCTCTATTTCTTCTCATAACCAAAAAGCTTCTTCACAACAACGAGAAGAAGGTGGTTAACGTTCCTCCTCCAAGCCCTCCAAAGCTTCCATTTTTGGGTCATTTACACCTCCTTGGCTCTCACCCACATCGCTCTTTATGGAACCTTTCAAAAAAACACGGCCCCATCATGCTCCTCAAACTCGGCTGTGTTCCTACCGTCATCATATCTTCAGCAGCCGTCGCAAGAGGGCTATTCAAACACCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACAGGCAGTGGAAGATTTTCATACAACTTTCAAGACCTGAATTTATCCCCATATGGTGAGCGTTGGAGAGAGCTTCGAAAGATTTTTATACTTGAACTCTTCAGCACCAAGCGAGTACAATCATTTCAACATATTAGAGAAGAGGAAGTGGGTAAGCTATTAAAGATCATATCTAATTCCGCATCTCTTGGAACTCCAATTGATTTGAGTCAAACCATATATACTCTTACTGCAAATATAACCTTCCGAATTGCTTTCGGTAAAAGCTTTAGTGGGGGAGAATTAGATAATGAGAATTTTCAACACATCATTCGTAGAGCAATGGTTGCATTAGGAAGCTTCTCGGCGACTGATTTCTTTCCTGGTGTGGGTTGGATTATTGATCGGCTGAGTGGTGTTCATGGGATATTGGAGAAGAGCTTTGCTGAAGTGGATGCCATTTTTCAACAGGTAGTTGATGATCGCATCAAATTCTTGGAAATTTCTCGAAATGAAGAAAATATTGTTGATGTTTTGTTGAGAATGGAGAGAGACAGCTCAAAATTTGATGCAGTGAAATTTACCCAAGATCGTGTTAAGGCACTTATCATGGATATCTTTCTAGCAGGAGTGGAAACAGGAGCAAATACCATTATTTGGACAATGACAGAGCTTATGAGAAACCCAAGGGTAATGAAAAATCTACAAGACCAAATCAGAAGTTGCATAAAGGAAGATCAAGTGAAAGAGATCAATCTTGAAAAGCTTCCATATCTAAAAATGGTAGTGAAAGAAGTTTTGAGGTTGCATCCACCAGCCCCACTTCTAGTTCCAAGAGAAACCATGTCTCATTTTAAGCTCAATGGTTATGATATTCATCCCAAGACTCATCTTCACGTCAATGTATGGGCCATTGGTCGAGACCCAGAGTCTTGGACTAACCCTGAAGAGTTTTTTCCAGAGAGATATGTGGGAAGTAATATTGATTATAAAGGACAAAACTTTGAATTATTACCTTTTGGAGCTGGTCGAAGAGTTTGTCCTGGGATGAATATGGGAATCTTTACAATAGAGTTGACATTGGCTAATTTGTTATTGTGTTTTGATTGGAAATTGCCCGATGGAATGAAAGAAGAAGATGTAGACATGGAAGAAGATGTTGGTATTACTGTTGCCAAAAAATCACTTCTTAAACTTATTCCCGTCCCTTACTTAAAGTAG | 1518 | 39.59 | MHYFIWVPLLFLLIPLFLLITKKLLHNNEKKVVNVPPPSPPKLPFLGHLHLLGSHPHRSLWNLSKKHGPIMLLKLGCVPTVIISSAAVARGLFKHHDLASCSRPRLTGSGRFSYNFQDLNLSPYGERWRELRKIFILELFSTKRVQSFQHIREEEVGKLLKIISNSASLGTPIDLSQTIYTLTANITFRIAFGKSFSGGELDNENFQHIIRRAMVALGSFSATDFFPGVGWIIDRLSGVHGILEKSFAEVDAIFQQVVDDRIKFLEISRNEENIVDVLLRMERDSSKFDAVKFTQDRVKALIMDIFLAGVETGANTIIWTMTELMRNPRVMKNLQDQIRSCIKEDQVKEINLEKLPYLKMVVKEVLRLHPPAPLLVPRETMSHFKLNGYDIHPKTHLHVNVWAIGRDPESWTNPEEFFPERYVGSNIDYKGQNFELLPFGAGRRVCPGMNMGIFTIELTLANLLLCFDWKLPDGMKEEDVDMEEDVGITVAKKSLLKLIPVPYLK | 505 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35299089 | 35308204 | - | ClG42_05g0279700.10 | Clacu05g2797 | 250544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2797 | 505 | SUPERFAMILY | Cytochrome P450 | 37 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | Pfam | Cytochrome P450 | 37 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | FunFam | Cytochrome P450 83B1 | 22 | 499 | - | - | |
| Clacu05g2797 | 505 | PANTHER | CYTOCHROME P450 71B11-RELATED | 14 | 501 | IPR050193 | - | |
| Clacu05g2797 | 505 | CDD | CYP71-like | 66 | 496 | - | - | |
| Clacu05g2797 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2797 | 505 | Gene3D | Cytochrome P450 | 22 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g2793 | Clacu-Chr5:35283035 | Clacu05g2797 | Clacu-Chr5:35299089 | 7.50E-194 | dispersed | |
| Clacu05g2795 | Clacu-Chr5:35292742 | Clacu05g2797 | Clacu-Chr5:35299089 | 6.70E-55 | dispersed | |
| Clacu05g2797 | Clacu-Chr5:35299089 | Clacu05g2799 | Clacu-Chr5:35330899 | 2.00E-207 | dispersed | |
| Clacu05g2796 | Clacu-Chr5:35294318 | Clacu05g2797 | Clacu-Chr5:35299089 | 1.20E-101 | tandem | |
| Clacu05g2797 | Clacu-Chr5:35299089 | Clacu05g2798 | Clacu-Chr5:35318748 | 1.10E-216 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2797 | - | - | - | 0.0 |