Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2798 | ATGATGAATAGCATTTTCATTTGGATTCCTCTGCTTTTTCTCTTAATTTCTCTACTTCTTCTCAAAATAAAAAAGCTTCTTCACAACAACAGGAAGCTTAGAACTCTAGTTCCTCCTCCAGGCCCTTCACAGCTTCCTCTGTTGGGTCATTTACACCTCATTGGCTCCCACCCCCATCGCTCTTTATGGAACCTTTCAAGAACCCATGGCCCCATCATGCTCCTCAAATTCGGCTCAGTCCCAACCGTGATCATCTCTTCTGCGGCGGTCGCACAAGAGTTGTTCAAACTCCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAGCAGCAACCGGAAGATTTTCATACAACTTCTTAGACCTGAATTTATCCCCATACAGTGAACGTTGGAAGGAGCTTCGAAAGATTTGTATTCTTGAGCTGTTTAGTGCCAAACGGGTGCAGTCTTTTCAACATATTAGAGAAGAAGAAGTGAATTTAGTATTGAATTCCATCTCTCAATCATCAGCTTCTTCAACTATAGTTGATTTGAAGGCAAAATCTTATTCTCTCACGGCTAATATCTTGACCCGGATCGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATGATGAGAATTTTGAAGGGTGTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTCTTTCCCGGTTTCGGGTGGATTATTGATCGGCTCACCGGTGTTCATGGGCGTTTGGAGAAAAGCTTTGAGGAGTTGGATGCTTTTTATGAACATGTAGTCAAGGATCGAGTTGACTTTTGGACGGCTTTTCAAATGGAAGAAAATATCGTTGATGTTTTGTTGAGAATGGAGAGAGAGAACTCACCCATATTCACTCCAGATTGCATCAAGGCGCTTATCATGGATATATTTCTAGCTGGAGTGGAAACAGGGGCAAACATGATCATCTGGGCAATGGCAGAGCTTGTTAAGAATTCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGAAGCTGCATAAAAGAAGATCGAGTGAAGGAAAGTGAGTTGGAAAAGCTTGGATATCTAAAAATGGTGGTAAAGGAGGTTTTAAGGCTTCATGCGCCACTCCCACTTCTCCTACCAAGAGAAACAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTTGTCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGACGAAGGATATGTCCGGGTGTGAATATGGGGATTGCAACAGTAGAACTGGCATTGGCTAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA | 1515 | 41.45 | MMNSIFIWIPLLFLLISLLLLKIKKLLHNNRKLRTLVPPPGPSQLPLLGHLHLIGSHPHRSLWNLSRTHGPIMLLKFGSVPTVIISSAAVAQELFKLHDLASCSRPRLAATGRFSYNFLDLNLSPYSERWKELRKICILELFSAKRVQSFQHIREEEVNLVLNSISQSSASSTIVDLKAKSYSLTANILTRIAFGKSFRGSELDDENFEGCIQRASAALGSFSASDFFPGFGWIIDRLTGVHGRLEKSFEELDAFYEHVVKDRVDFWTAFQMEENIVDVLLRMERENSPIFTPDCIKALIMDIFLAGVETGANMIIWAMAELVKNSKVMKKLQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFCPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKEDVDMDEDFGITVTKKSPLQLLPIPYFKSY | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35318748 | 35321375 | - | ClG42_05g0279800.10 | Clacu05g2798 | 250545 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2798 | 504 | FunFam | Cytochrome P450 83B1 | 25 | 496 | - | - | |
| Clacu05g2798 | 504 | Pfam | Cytochrome P450 | 39 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | CDD | CYP71-like | 68 | 493 | - | - | |
| Clacu05g2798 | 504 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 498 | IPR050193 | - | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 66 | 85 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | Gene3D | Cytochrome P450 | 24 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2798 | 504 | SUPERFAMILY | Cytochrome P450 | 39 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g2796 | Clacu-Chr5:35294318 | Clacu05g2798 | Clacu-Chr5:35318748 | 6.60E-84 | dispersed | |
| Clacu05g2798 | Clacu-Chr5:35318748 | Clacu05g2800 | Clacu-Chr5:35345916 | 5.00E-198 | dispersed | |
| Clacu05g2797 | Clacu-Chr5:35299089 | Clacu05g2798 | Clacu-Chr5:35318748 | 1.10E-216 | tandem | |
| Clacu05g2798 | Clacu-Chr5:35318748 | Clacu05g2799 | Clacu-Chr5:35330899 | 9.30E-253 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2798 | - | - | - | 0.0 |