Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu05g2799 | ATGCATATCCTTTCCATCTGGGTCCTTTCTCTTCTCCTTCTCTTGTGTTCTCTGATATTGCTTCTTAAAACAAACAAGAATGTTGAAAAACACAAGAATAATAAGCTTAAAATTGTTCCTCCTCCTACCCCTCTAAAGCTTCCTTTGTTGGGTCATTTACACCTCATTGGCTCTCACCCCCATCGCTCCTTATGGAACCTTTTAAAAACACATGGCCCCATCATGCTCCTCAAATTCGGCTCGGTCCCCACCGTCGTGATCTCTTCAGCAGCCGTCGCACAAGAGTTGTTCAAAAAACACGACCTTGCTTCTTGCAGCCGCCCTCGCTTAGCCGCCACAGCAAGATATTCATACAACTACTTAGACTTGATTTTTTCCCCATATGGTATTCATTGGAGGGAGGTTCGAAAGATTTGTATTCTCGAGCTGTTTAGTGCCAAACGCGTGCAATCTTTTCAGCATATTAGAGAAGAAGAAGTGAATTTATTATTGAATTCCATCTCCCAATCCTCATCTTCTTCAACTTTAGTTGATTTGAAGGCAAAATCTTATTCTCTCACGGCTAATATATTGACCCGGATTGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGAGAATTTCGAAGGGGTTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTATTTCCTAGTTTCGGGTGGATTATTGATCGGCTTAACGGTGTTCATGAGCGACTGGAAAAAAGCTTTGCGGAGTTGGATGCTTTTTTAGAACATGTAATCAAGGATCGCATTGACTTTTGGAAGGCTTCTCAAAAGGAAGAAAATTTTGTTGATGTTTTGTTAAGAATGGAGAGAGATTGCCCAACCAAATTCACCCGAGATTGCATCAAGGCACTTGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGGGCAAACATGATCATCTGGGCAATGGCAGAGCTTGTTAAGAATTCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGAAGTTGCATAAAAGAAGATCGAGTGAAGGAAAGTGAGTTGGAAAAGCTTGGATATCTAAAAATGGTGGTAAAGGAGGTTTTAAGGCTTCATGCGCCACTCCCACTTCTCCTACCAAGAGAAACAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTTGTCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGACGAAGGATATGTCCTGGTGTGAATATGGGGATTGCAACAGTAGAACTGGCATTGGCTAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA | 1524 | 40.42 | MHILSIWVLSLLLLLCSLILLLKTNKNVEKHKNNKLKIVPPPTPLKLPLLGHLHLIGSHPHRSLWNLLKTHGPIMLLKFGSVPTVVISSAAVAQELFKKHDLASCSRPRLAATARYSYNYLDLIFSPYGIHWREVRKICILELFSAKRVQSFQHIREEEVNLLLNSISQSSSSSTLVDLKAKSYSLTANILTRIAFGKSFRGSELDNENFEGVIQRASAALGSFSASDLFPSFGWIIDRLNGVHERLEKSFAELDAFLEHVIKDRIDFWKASQKEENFVDVLLRMERDCPTKFTRDCIKALVMDIFLAGVETGANMIIWAMAELVKNSKVMKKLQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFCPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKEEDVDMDEDFGITVTKKSPLQLLPIPYFKSY | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35330899 | 35333234 | - | ClG42_05g0279900.10 | Clacu05g2799 | 250546 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | SUPERFAMILY | Cytochrome P450 | 41 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 501 | IPR050193 | - | |
| Clacu05g2799 | 507 | FunFam | Cytochrome P450 83B1 | 26 | 499 | - | - | |
| Clacu05g2799 | 507 | CDD | CYP71-like | 70 | 496 | - | - | |
| Clacu05g2799 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu05g2799 | 507 | Gene3D | Cytochrome P450 | 24 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu05g2799 | 507 | Pfam | Cytochrome P450 | 41 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g0326 | Clacu-Chr3:3756594 | Clacu05g2799 | Clacu-Chr5:35330899 | 1.00E-55 | dispersed | |
| Clacu05g2797 | Clacu-Chr5:35299089 | Clacu05g2799 | Clacu-Chr5:35330899 | 2.00E-207 | dispersed | |
| Clacu05g2799 | Clacu-Chr5:35330899 | Clacu05g2802 | Clacu-Chr5:35355450 | 8.30E-201 | dispersed | |
| Clacu05g2798 | Clacu-Chr5:35318748 | Clacu05g2799 | Clacu-Chr5:35330899 | 9.30E-253 | tandem | |
| Clacu05g2799 | Clacu-Chr5:35330899 | Clacu05g2800 | Clacu-Chr5:35345916 | 9.50E-205 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu05g2799 | - | - | - | 0.0 |