Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2802 ATGGTGCTATTATCTTCTCTACTGTTTCTTAAAACAAAGATGAAATTTGGAAGACACAATAACAAGAATGTTATTGTTCCTCCTCCAAGTCCACCAAAGCTTCCTTTCTTAGGTCATTTACACCTCATTACCTCTCTCCCCCATCGCTCTTTTTTTAACCTTTCAAAAAAATATGGCCCCGTCATCCTCCTCAAACTCGTCTCCATCCCGACCGTCGTAGTCTCCTCCGCCGATGCTGCAAAAGAGGTGCTAAAACTTCACGACCTTGCTTCTTGCAGCCGACCTCAATCCGCCGCTGGAGCAAGATTTTCATACAATTATCTAGACATTGGGTTAGCGCCATATGGTGACCATTGGAGGGAAGTTAGAAAAATTTGTGTGCTTGAGCTGTTCAGTGCTAGAAGAGTGCAATCATTTCAAATGATAAGAGAAGAAGAGATTGGTGTGCTGTTGAACTCCATTTCTCAATCTTCATCTTTTGCCACTCCAATTGATTTGAGTGAGAAATTGTACTCTCTCACTGCAAATATGATAGCTCGAATTGCTTTTGGGAAGTGCTTTAGAGGAAGTGAGTTAGAAAATAAGAATTTTCAAAAGGTTATTCGAGGAGGACTTGTAGCATTGGGAAGCTTTTCAGCCACTGACTTCTTTCCTAAAGTGGGTTGGATTATTGATCGGATTAGTGGTGTTCATAGGAGATTGGAGAAGAGTTTTGCTGAGTTGGATACTTTTCTTCAACATGTAGTTGATGATCGCATTAAATTTAGGGAGATTTCTCATAATAATGATGATGATCAAGAAAACATTCTTGATGTTTTGTTGAAAAAGGAGAAGGATGGCTCTGAATTTGATGCAGTGAAACTCACTAGAGATTGCATCAAAGCACTTGTCATGGATATATTTATAGCTGGAGTGGAAACAGGAGCAAACACACTTGTTTGGGCAATGACAGAGTTGGTAAAAAATCCAAAAGTGATGAAAAAGCTACAAGGTGAGATCAGAAGTTGCGTAAGAAAAAGTAAAGTAGTAAAAGAGAGGGACCTCGAAAATCTTGAATACCTAAAAGCCGTAGTGAAAGAAGTTCTAAGGTTGCATGCACCCGCCCCACTTCTGCTTCCAAGAGAAACCATGTCCCATTTTAAGCTAAATGGTTATGATATTAATCCAAAAACTCGTGTTCATGTCAACGTGTGGGCGATCGGACGAGACCCAAAATTATGGACTAACCCAGAAGCATTCTTGCCTGAGAGATTTATAGGGAGTGATATTGATTACAAAGGGCAGAATTTTGAGTTATTGCCATTTGGATCTGGTCGAAGAATTTGTCCTGGGATGAACATGGCAACCATTACAGTGGAGTTAGCATTGTCTAATATGTTATTGTGTTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTGGACATGGAAGAGGAACCTGGTATTGCAATTGCCAAGAAATCACCTCTTCACCTTCTTCCACTCCCTTACTTCAACTCCAAACAATAG 1515 39.87 MVLLSSLLFLKTKMKFGRHNNKNVIVPPPSPPKLPFLGHLHLITSLPHRSFFNLSKKYGPVILLKLVSIPTVVVSSADAAKEVLKLHDLASCSRPQSAAGARFSYNYLDIGLAPYGDHWREVRKICVLELFSARRVQSFQMIREEEIGVLLNSISQSSSFATPIDLSEKLYSLTANMIARIAFGKCFRGSELENKNFQKVIRGGLVALGSFSATDFFPKVGWIIDRISGVHRRLEKSFAELDTFLQHVVDDRIKFREISHNNDDDQENILDVLLKKEKDGSEFDAVKLTRDCIKALVMDIFIAGVETGANTLVWAMTELVKNPKVMKKLQGEIRSCVRKSKVVKERDLENLEYLKAVVKEVLRLHAPAPLLLPRETMSHFKLNGYDINPKTRVHVNVWAIGRDPKLWTNPEAFLPERFIGSDIDYKGQNFELLPFGSGRRICPGMNMATITVELALSNMLLCFDWKLPNGMKEEDVDMEEEPGIAIAKKSPLHLLPLPYFNSKQ 504
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 35355450 35357893 - ClG42_05g0280200.10 Clacu05g2802 250549
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2802 504 FunFam Cytochrome P450 83B1 14 495 - -
Clacu05g2802 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu05g2802 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 Gene3D Cytochrome P450 13 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 CDD CYP71-like 57 492 - -
Clacu05g2802 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 PANTHER CYTOCHROME P450 71B11-RELATED 9 496 IPR050193 -
Clacu05g2802 504 SUPERFAMILY Cytochrome P450 28 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu05g2802 504 Pfam Cytochrome P450 28 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2799 Clacu-Chr5:35330899 Clacu05g2802 Clacu-Chr5:35355450 8.30E-201 dispersed
Clacu05g2800 Clacu-Chr5:35345916 Clacu05g2802 Clacu-Chr5:35355450 1.10E-283 dispersed
Clacu05g2802 Clacu-Chr5:35355450 Clacu06g1849 Clacu-Chr6:29002559 8.50E-113 dispersed
Clacu05g2801 Clacu-Chr5:35353012 Clacu05g2802 Clacu-Chr5:35355450 7.10E-136 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2802 - - - 0.0