Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu05g2809 ATGGCGGAAACCGGCGTATACGGCCGTTTTCTGGCGGGGAGTTTAGACCCAAGAGCCCAAGAGTTCCGGCCAAGGCATTCCACCACTCTGTTCATGCCGCAGCCCCATCGGGTTTTCTTTCCGTACCCACCAATTGCTGATGTTCCTCTCCTGCCGTACTGCGATGGCGGTGTAACTTACGCGCAATTTCCAGCGGCGGAGCCAGCGTACTTTCCGATGCGGTTGCCGGTGTCGTCGGTTGCGACTCGGTCGCTGGTGATGAGTTCGGTTCCTTGCGACGTAAGCGAGACGATGGTGAGAAGGGAATTGGAAGCGTTTGGGGAGGTCCGAGGAGTGCAAATGGAGAGAGTTAAAGAAGGGATTGTAATTGTTCATTTCTATGATATTCGCCACGCCGAGAGAGCTTTGCGAGAGATTCGGGATCAGCACATGCACCATCAATGTCGTCTTCGTACCTACTTCAACAGCAATAATAACGGTTTCTTGTTTCCAAATTCCCCTCTCCCTCGCCCTTCTCCGACGCCTGGCCTCATCGCCGGCCATGCTGTCTGGGCTCAGTTCATCGTTCCGGCTGGCAAGAATCAGGGCACCATCGTCGTCTTCAATTTGGATTCCACCGTTTCCACTTCTTGTCTCAGAGAAATCTTCGAGGCTTTTGGACCCGTGAAGGAGTTGAGAGAGACGCCATTGAAGAAACAACAAAGGTTCGTTGAATTTTTCGACATCAGGGACGCTGGAAACGCTCTTAAGGAGATGAACGGAAAGGAAATCAATGGAAAACCGGTTGTGATTGAGTTCAGTCGGGCGGGAGGTCATGGCAACAAGTTCTTCAATGCCAACTTGACTGCTCCGGCCATCTGCGGCTCGAATAATATATACTCCAGGAGTCTAAAATGCCCACCGCCGCCGCCGAGAAATTTCTCTGGTGGGGCAGCTTCAAATGTTCCGCCACGCTGGTATTATTCGAAACCTCATAGTTCTAGGAAATTGAATCCGAGGAAGGGGAGTCGAAGCCCGAGAAACCCCAGGAAGAGCTTGGGGGCCGAGGATGTGAATGGAAAAATGGCTTCCCTCGATTTGGAAGGCGGCGGTGTGTGTAATGAAATTGAAGAGAGAGAATCATGTGAGGTTTTGAGAAAGAATTCAAAGACCAGCCACAGTAGTCCCGTTGTAGCTGCTGACCAACAACAACAACTGCAGCCCAGTAGGAATAAGCTAAGGAAATGTAGACCGTCTAGGAAATTCGATACTCGATTCCTGATAAACAATAACGACTCCGATTGCAAAGATTCGAGAACCACTGTGATGATCAAGAACATCCCTAACAAGTACAGTCAGAAATTGTTGTTGAACATGCTGGACAATCATTGCATTCACTGCAACGAGCAGATGGGCGATCGCCAAAACCAACCACTTTCCTCCTACGATTTTGTATATCTCCCCATTGATTTCAACAACAAGTGCAATGTTGGATATGGGTTTGTAAACATGACCTCACCGGAGGCCACATGGAGGTTGTACAAGGCGTTTCATCTTCAACCTTGGGAGGTTTTCAACTCAAGAAAAATCTGTGAAGTCACCTATGCTAGAGTACAGGGACTGGAATCTCTGAAGGAGCACTTTAAGAACTCAAAGTTCCCATGCGAGATGGACCACTACCTGCCAGTAGTGTTTTCACCGCCTCGGGACGGGAGGCTACTGACGGAGCCACTGCCGATTGGCGGCCAGAGACAGCCCGTCTCCATTGGCTTCTCAACTACTACTCTATCTTCTGGGAATGCTGAGATGGACGGTGAAGATGATGTTGCAATTGCGACAACACTGGTTGACCAACAAGAGGAAGGCATGAATGGAAGTAGCAGTAGCAAAAGTGGCGGTGGTGTTGACGAAGAATACGACGGTGATGAGTATCAATTAGCAGCAGTCAGCTTTGGTGAAGCAGATGATAAAAAGGGCAGAAGGAGAATAGTGAAGAAGTCCGTACGAATGGGAAGAAAGAAACAGTATTATGGCATTATGGGAAAGAAGAAAAATGGGCTTTTCAGATATGCTGATTGGGTGGATAAGTTGCTGATTTTAATGGGTTCTTTAGGGAGTATTGGAGATGGGATTACAACTCCACTCACTATGATTGTTCTCAGTGGTATGATCAATAACTATTCTGCCTCTGATTCCAACTCTTTTTCCAATCATGTAGTGGACAGGTATGCACTCAATCTGCTTTATATTGCTATTGGAGTTGGACTCTGTGCTTTCTTTGAGGGAGTGTGCTGGACTAGGACAGCAGAAAGACAGACATCTCGCATGAGAATGGAGTACCTAAAATCAGTTTTGAGACAAGAAGCTGGTTTTTTCGACAGTAATCAAGCCGCTTCTTCTACATTCCTTATTGTTTCCTCCATCACTTCTGATTGCCACACTATCCAGGATACCATAGCTGAAAAGATACCAAACTTTCTGGCTCACGTCTCCGGCTTTATCTTCTGCATTCCTGTTGCATTTATGCTCTCATGGAAGCTTGCTTTGGCTGCCCTTCCATTCTCTCTCATGTTTGTTATTCCAGGGGTTGGATTTGGGAAGGTTTACAAGAACTTAGGTGTCAAGGCCAAAGAGTCTTATGTGGTTGCTGGTAGCATTGCTGAACAAGCAGTCTCTTCGATACGCACTGTGTATTCATACGTAGGAGAGCTCCAAACTCTAGAGAAGTTCAGTCATGCACTTCAAAAAAGCATGAACTTTGGCACTAAACAAGGCCTTGGGAGAGGACTTATGATGGGCAGCATGGCAATGATATATGCTGCTTGGGCATTTCAGGCATGGATAGGCGGTATTCTTGTCACTGAAAGAGGAGAAACAGGTGGAGCTATTTTGATATCTGGAATATGTATCATTTTTGGTGGACTGTGTGCTATGAATGCACTCCCAAATCTCTCTTTCATCTCTGAGTCAACAATTGCTGCATCTCGCATTTTCGAAATGACTGACCGCGTTCCCACCATAGATGCTGAAGATGGTAGAGGAAAATCTTTGGACTATTTAAGAGGAAAAATTGAGTTTAGAGATGTTGAATTTTCCTATCCTTCCAGACCGGCAACCCCCATTCTTCAAGGACTTAATCTCAAAATAAAGGCCGGGGAGACAGTAGGCCTTGTTGGAGGTAGTGGCTCAGGCAAGTCCACTGTGATTCATTTATTGGAGAGATTCTATGACCCTGTCAAAGGAGACATTCTTCTTGATGGTCATAAGATAAAGAAGCTTCAGCTCAAATGGCTGAGATCCCAAATGGGATTAGTCAATCAAGAGCCAATTCTATTTGCAACCTCCATAAAGGAAAATATTTTGTTTGGTAAGGAAGGAGCTTCAATGCAACTTGTTAAAAGAGCAGCTAAGGCTGCAAATGCTCATGATTTCATTGCAACATTACCTGATGGATATGAGACTCAAGTGGGGCAATTTGGTGTTCAATTGTCTGGAGGGCAAAAGCAAAGAATTGCAATAGCAAGGGCTCTAATCAGAGATCCCAAAATTCTTCTATTGGATGAAGCAACCAGTGCTTTGGATGCAGAGTCTGAAAGAATTGTACAAGATGCCCTGGACCAAGTTTCACATGGAAGGACTACCATTGTCATTGCGCACCGTCTCTCGACAATCCAAAAGGCTGATCAGATTCTTGTTCTTCAGTCAGGTAGAGTGGTAGAGTCTGGTTCTCATGAGGAGTTACTTCAAAGAAATAATGAAGGAATTTACAGAAAAATGGTGCAATTGCAGCAATCTTGTATGGAAAATGAAGCTTCTAGTTCTTTGTATCATTCTACTAGAGAAACAAATCTCCAACAAATAGTAGGAGCCAAAACTCCCTTGACACCAATAAACCAAATATCAGTTCGTCGAAGCAGCCCAATCTGGCACAGCAGTCCAGTATATTCCATCAGCATGTCATCTCCATACTCGGTCGACGTTGACTCTAGTGATTACAGTTATTGTGAAGGCTTGAAGAATACCTCGAGTTCTTCTCAATCTCCTTTGCAATGGCGCCTCTGGAGATTGAATGCACCTGAGTGGAAACAGGCATTACTTGGTTGTATGGGTGCTATAGGCACTGGAGTTACTCAGCCAATATATTCCTATTGCTTAGGAACAATCACCTCAGTTTACTTCCTAAAGGACAGTGAGGCTATTAAATCAAACATTAGATTCTATTGCTTCATATTTTTAGGCATAACAGTTCTTAGTTGTATATCCAATCTAGTCCAGCATTACAGCTTTGCAATCATGGGAGAAAATTTAACCAAGAGGGTGAGAGAAAAAATGCTTGAAAAAATCATGACCTTTGAGATTGGATGGTTTGATCAAGACGAGAATACAAGTGCCGCGATATGTGCACGACTAGCTGTTGAAGGAAACTTGGTTAGATCTCTTATAGCAGAAAGAACATCACTATTGGTTCAGGTAGTTGTGACTGCCACATTCGCATTTGTGCTTGGGTTAGTTGTGACATGGAGAGTAGCCATTGTAGCAATTGCTATGCAACCACTTATTATTGGAAGCTTCTATTCAAGAAAGGTTCTGATGAGAAGTATATCTGAGAAGGCTAGGAAATCACAAGGTGAAGGCAGTCAACTAGCTAGTGAAGCCATTACCAACCACAGAACTATTGCTGCATTTTCTTCTCAAGATAGGATTTTGAGTCTGTTTGAAGCTTCAATGGAATCTCCCAAGAAGGAGAATGTAAAACAATCATGGATTTCGGGTTTTGGTTTATTCAGCTCCCTATTTCTTACTACAGCAACAACAGCTTTGACACTGTGGTATGGAGGGAGACTAATAAATCAAGGATTAGTAACATCAAAACAACTTTTCCAAGCATTTTTCATCTTGATGAGCACTGGAAAGAACATTGCAGATGTAGGAAGCATGTCATCAGATATAGCAAAAGGTGCAAATGCCATAGGATCAATTTTTGGAATCCTAGATAGAGAAACTGAAATAGACCCTCAACAACTTGAAGGGTTAAAAGTTAAAGAGACAATTTGTGGAGAAGTAGAATTGAAGAATGTATTTTTCGCTTACCCGGCTAGGCCTGACCAATTGATCTTCAAGGGACTGAATCTAAAAATTGAAGCTGGAACAACAGTTGCGCTGGTTGGGCAGAGTGGTTCGGGTAAATCTACTGCCATTGGATTGATCGAAAGATTTTACGATCCTCAAAAGGGAGTAGTCCTCATTGATGGAATAGACATCAAGAGCTATAATCTGAGAAGTTTGAGGTCACACATTGCGCTAGTGAGTCAAGAACCCACACTTTTCGCAGGAAGTATACGCAATAACATTCTATTCGGGCAAGACGAACGTTCCGAAAACGAAATTAGGAAGGCTGCAAAACTTGCCAAGGCTCATGAGTTCATTAGTTGTATGAAGGATGGGTATGATACTCAATGTGGAGAAAGAGGAGTTCAGTTATCAGGAGGTCAGAAGCAGAGAATAGCTTTAGCAAGAGCCATATTGAAGAATCCAAAAATCCTTCTACTAGATGAGGCAACCAGTGCTTTGGATAGCCTGTCACAGACTTTAGTCCAAGAAGCATTGGAAAAGATGATGGTTGGTAGAACAAGCCTGGTCGTCGCTCATCGATTATCGACTATACAGAAAGCAGATTCAATAGCTGTAACAAAACAAGAGTACCAACCATATAACAGATTCAAGGCATTCCAACACACTTCCTCTACCATAAGAGTTCCATTTTTGTCATTTTTGCTCAGTAAACAGTCTAAGCATCAGTAG 5781 43.92 MAETGVYGRFLAGSLDPRAQEFRPRHSTTLFMPQPHRVFFPYPPIADVPLLPYCDGGVTYAQFPAAEPAYFPMRLPVSSVATRSLVMSSVPCDVSETMVRRELEAFGEVRGVQMERVKEGIVIVHFYDIRHAERALREIRDQHMHHQCRLRTYFNSNNNGFLFPNSPLPRPSPTPGLIAGHAVWAQFIVPAGKNQGTIVVFNLDSTVSTSCLREIFEAFGPVKELRETPLKKQQRFVEFFDIRDAGNALKEMNGKEINGKPVVIEFSRAGGHGNKFFNANLTAPAICGSNNIYSRSLKCPPPPPRNFSGGAASNVPPRWYYSKPHSSRKLNPRKGSRSPRNPRKSLGAEDVNGKMASLDLEGGGVCNEIEERESCEVLRKNSKTSHSSPVVAADQQQQLQPSRNKLRKCRPSRKFDTRFLINNNDSDCKDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQMGDRQNQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATWRLYKAFHLQPWEVFNSRKICEVTYARVQGLESLKEHFKNSKFPCEMDHYLPVVFSPPRDGRLLTEPLPIGGQRQPVSIGFSTTTLSSGNAEMDGEDDVAIATTLVDQQEEGMNGSSSSKSGGGVDEEYDGDEYQLAAVSFGEADDKKGRRRIVKKSVRMGRKKQYYGIMGKKKNGLFRYADWVDKLLILMGSLGSIGDGITTPLTMIVLSGMINNYSASDSNSFSNHVVDRYALNLLYIAIGVGLCAFFEGVCWTRTAERQTSRMRMEYLKSVLRQEAGFFDSNQAASSTFLIVSSITSDCHTIQDTIAEKIPNFLAHVSGFIFCIPVAFMLSWKLALAALPFSLMFVIPGVGFGKVYKNLGVKAKESYVVAGSIAEQAVSSIRTVYSYVGELQTLEKFSHALQKSMNFGTKQGLGRGLMMGSMAMIYAAWAFQAWIGGILVTERGETGGAILISGICIIFGGLCAMNALPNLSFISESTIAASRIFEMTDRVPTIDAEDGRGKSLDYLRGKIEFRDVEFSYPSRPATPILQGLNLKIKAGETVGLVGGSGSGKSTVIHLLERFYDPVKGDILLDGHKIKKLQLKWLRSQMGLVNQEPILFATSIKENILFGKEGASMQLVKRAAKAANAHDFIATLPDGYETQVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQDALDQVSHGRTTIVIAHRLSTIQKADQILVLQSGRVVESGSHEELLQRNNEGIYRKMVQLQQSCMENEASSSLYHSTRETNLQQIVGAKTPLTPINQISVRRSSPIWHSSPVYSISMSSPYSVDVDSSDYSYCEGLKNTSSSSQSPLQWRLWRLNAPEWKQALLGCMGAIGTGVTQPIYSYCLGTITSVYFLKDSEAIKSNIRFYCFIFLGITVLSCISNLVQHYSFAIMGENLTKRVREKMLEKIMTFEIGWFDQDENTSAAICARLAVEGNLVRSLIAERTSLLVQVVVTATFAFVLGLVVTWRVAIVAIAMQPLIIGSFYSRKVLMRSISEKARKSQGEGSQLASEAITNHRTIAAFSSQDRILSLFEASMESPKKENVKQSWISGFGLFSSLFLTTATTALTLWYGGRLINQGLVTSKQLFQAFFILMSTGKNIADVGSMSSDIAKGANAIGSIFGILDRETEIDPQQLEGLKVKETICGEVELKNVFFAYPARPDQLIFKGLNLKIEAGTTVALVGQSGSGKSTAIGLIERFYDPQKGVVLIDGIDIKSYNLRSLRSHIALVSQEPTLFAGSIRNNILFGQDERSENEIRKAAKLAKAHEFISCMKDGYDTQCGERGVQLSGGQKQRIALARAILKNPKILLLDEATSALDSLSQTLVQEALEKMMVGRTSLVVAHRLSTIQKADSIAVTKQEYQPYNRFKAFQHTSSTIRVPFLSFLLSKQSKHQ 1926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35410430 35422094 - ClG42_05g0280900.10 Clacu05g2809 250556

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu05g2809 1926 CDD ABC_6TM_Pgp_ABCB1_D2_like 1347 1663 - -
Clacu05g2809 1926 Pfam ABC transporter 1035 1184 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 CDD ABC_MTABC3_MDL1_MDL2 1017 1256 - -
Clacu05g2809 1926 FunFam ABC transporter B family member 20 1671 1894 - -
Clacu05g2809 1926 MobiDBLite consensus disorder prediction 381 405 - -
Clacu05g2809 1926 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1681 1918 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 FunFam ABC transporter B family member 4 1007 1264 - -
Clacu05g2809 1926 SUPERFAMILY ABC transporter transmembrane region 1345 1664 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Clacu05g2809 1926 MobiDBLite consensus disorder prediction 610 630 - -
Clacu05g2809 1926 SMART AAA_5 1044 1230 IPR003593 GO:0016887(InterPro)
Clacu05g2809 1926 SMART AAA_5 1708 1899 IPR003593 GO:0016887(InterPro)
Clacu05g2809 1926 MobiDBLite consensus disorder prediction 379 406 - -
Clacu05g2809 1926 ProSitePatterns ABC transporters family signature. 1820 1834 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 MobiDBLite consensus disorder prediction 610 626 - -
Clacu05g2809 1926 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 269 IPR000504 GO:0003723(InterPro)
Clacu05g2809 1926 Gene3D ABC transporter type 1, transmembrane domain 1589 1669 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Clacu05g2809 1926 Gene3D ABC transporter type 1, transmembrane domain 1337 1585 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Clacu05g2809 1926 Gene3D - 1007 1257 IPR027417 -
Clacu05g2809 1926 Gene3D - 1670 1892 IPR027417 -
Clacu05g2809 1926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1009 1256 IPR027417 -
Clacu05g2809 1926 MobiDBLite consensus disorder prediction 304 354 - -
Clacu05g2809 1926 Pfam ABC transporter 1700 1848 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 Pfam RNA recognition motif 2 432 542 IPR007201 -
Clacu05g2809 1926 Pfam RNA recognition motif 198 262 IPR000504 GO:0003723(InterPro)
Clacu05g2809 1926 Pfam ABC transporter transmembrane region 694 954 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Clacu05g2809 1926 Pfam ABC transporter transmembrane region 1359 1628 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Clacu05g2809 1926 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1358 1645 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Clacu05g2809 1926 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 693 982 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Clacu05g2809 1926 FunFam Terminal EAR1-like 1 385 538 - -
Clacu05g2809 1926 Gene3D - 78 155 IPR012677 -
Clacu05g2809 1926 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 157 IPR000504 GO:0003723(InterPro)
Clacu05g2809 1926 CDD ABC_MTABC3_MDL1_MDL2 1681 1889 - -
Clacu05g2809 1926 SUPERFAMILY ABC transporter transmembrane region 680 1001 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Clacu05g2809 1926 ProSitePatterns ABC transporters family signature. 1156 1170 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 PANTHER ABC TRANSPORTER B FAMILY 663 1280 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Clacu05g2809 1926 CDD ABC_6TM_Pgp_ABCB1_D1_like 692 990 - -
Clacu05g2809 1926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1675 1890 IPR027417 -
Clacu05g2809 1926 Gene3D ABC transporter type 1, transmembrane domain 680 1276 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Clacu05g2809 1926 SUPERFAMILY RNA-binding domain, RBD 83 269 IPR035979 GO:0003676(InterPro)
Clacu05g2809 1926 CDD RRM3_EAR1_like 432 533 IPR034458 -
Clacu05g2809 1926 Gene3D - 191 275 IPR012677 -
Clacu05g2809 1926 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1017 1253 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Clacu05g2809 1926 SUPERFAMILY RNA-binding domain, RBD 411 514 IPR035979 GO:0003676(InterPro)
Clacu05g2809 1926 SMART rrm1_1 197 265 IPR000504 GO:0003723(InterPro)
Clacu05g2809 1926 SMART rrm1_1 84 153 IPR000504 GO:0003723(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu05g2809 K05658 - - csv:101217411 2072.74
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0928 Clacu-Chr3:11963489 Clacu05g2809 Clacu-Chr5:35410430 2.00E-28 dispersed
Clacu05g2809 Clacu-Chr5:35410430 Clacu09g1874 Clacu-Chr9:33515401 1.20E-284 dispersed
Clacu03g1066 Clacu-Chr3:19187543 Clacu05g2809 Clacu-Chr5:35410430 1.40E-21 transposed
Clacu03g1656 Clacu-Chr3:30203634 Clacu05g2809 Clacu-Chr5:35410430 0.00E+00 transposed
Clacu05g1636 Clacu-Chr5:24188027 Clacu05g2809 Clacu-Chr5:35410430 0.00E+00 transposed
Clacu05g2770 Clacu-Chr5:35103058 Clacu05g2809 Clacu-Chr5:35410430 1.40E-73 transposed
Clacu06g0167 Clacu-Chr6:1892160 Clacu05g2809 Clacu-Chr5:35410430 9.50E-12 transposed
Clacu09g1902 Clacu-Chr9:33934171 Clacu05g2809 Clacu-Chr5:35410430 0.00E+00 transposed
Clacu09g1971 Clacu-Chr9:34573027 Clacu05g2809 Clacu-Chr5:35410430 3.40E-66 transposed
Clacu05g2809 Clacu-Chr5:35410430 Clacu08g1910 Clacu-Chr8:28264589 3.40E-146 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g598 . . . . . . Bma14g01833 . . . . . . . Sed04g0552 . Cpe01g01579 Bhi07g01835 Tan04g0132 Cmetu10g1346 Lac13g0115 Hepe10g0058 . . Cla05g02618 Cam05g2805 Cec05g2841 Cco05g2873 Clacu05g2809 Cmu05g2657 Cre05g2773 . . . . Lsi04g00631 Csa05g02256 Chy10g00826 Cme10g00605 Blo06g00838 . Bda07g01649 . . . . . . . . Cma04g01791 Cma05g00053 Car04g01806 Car05g00041 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000338 3 4 5 4 3 4 2 4 4 4 4 4 7 4 4 8 4 5 4 4 4 4 6 4 4 4 7 6 4 8 136