Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0055 ATGGGCGGCGGAGGTGAAGGAACGACGCTGGAATTCACTCCGACGTGGGTTGTAGCCGCCGTCTGTACCGTCATCGTCGCCATTTCGCTCGCTTTAGAGCGTCTCCTTCACTTCCTCGGCAAATACCTCAAGAAGAAGAACCAGAAGCCGCTCAATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCACCATCTCTAAATTGTGTGTTCCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAGGATAAAGCTAAAGCTGAACATGGTTCGCCCTCGGGTGAAACTGGTTCGTCAACGACAACGCATTTTCAAACGTTCTTTGTTTCGAGTATTTCTGGTACGGCCAGGCGCCTTCTTTCTGAGGGATCGGCTTCACAGACTGGTTACTGTGCCAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCGTCCATGTGACATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTATGATACCGAACAAGTTCTAAAACCAAAAGTCACCCATGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGCTTTGGTAAAGATTCAGCTCTTCTTGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACGTTACGGCTTGGTTTCATTATGACGCACTGCAGGGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAAGATGACTTCAAGCATGTTGTTGGTATCAGTTGGTATCTTTGGATATTCGTGGTTGTCTTCTTGTTCCTTAATGTTAGTGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCATTCTTCTGCTCGCTGTGGGAACGAAGTTGGAACATGTGATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGTGATCTAGTAGTCCAACCGTCCGATGATCACTTTTGGTTTCATCGTCCCCGTATTGTTCTCTTCTTGATTCACTTTATACTTTTCCAAAACGCTTTTGAGATTGGATTCTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATCATTGGGGTATTTGTTCAGGTTCTTTGCAGCTACAGCACCCTACCGCTCTACGCCATTGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCTCAGAAGGTGAAGAAAAGAAAAGGACTTAGAGCAGCTGCTGATGGGTCCAGCCAAGGAGGGAAGGAAGGTGGTTCTACTGTGGGGATTCAACTGGGAAATGTTATGCGCAAGGCTTCTGCTCCTAATGAAATTAAGCCTGATGACCCCAAATCAAATGATCTGCCTTAG 1551 43.97 MGGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLNEALQKVKEELMLLGFISLLLTVFQGTISKLCVPESLTEHLLPCDLKDKAKAEHGSPSGETGSSTTTHFQTFFVSSISGTARRLLSEGSASQTGYCAKKNKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGFGKDSALLGWLHSFLKQFYASVTKSDYATLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVSGWHTYFWIAFIPFILLLAVGTKLEHVITQLAHEVAEKHVAIEGDLVVQPSDDHFWFHRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGGKEGGSTVGIQLGNVMRKASAPNEIKPDDPKSNDLP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 736365 742316 + ClG42_06g0005500.10 Clacu06g0055 250703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0055 516 MobiDBLite consensus disorder prediction 502 516 - -
Clacu06g0055 516 MobiDBLite consensus disorder prediction 494 516 - -
Clacu06g0055 516 PANTHER MLO-LIKE PROTEIN 1 1 480 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu06g0055 516 Pfam Mlo family 8 477 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0033 Clacu-Chr2:398039 Clacu06g0055 Clacu-Chr6:736365 2.80E-12 dispersed
Clacu02g0034 Clacu-Chr2:401630 Clacu06g0055 Clacu-Chr6:736365 2.20E-111 dispersed
Clacu06g0055 Clacu-Chr6:736365 Clacu08g1088 Clacu-Chr8:20867670 6.90E-102 dispersed
Clacu06g0055 Clacu-Chr6:736365 Clacu02g2159 Clacu-Chr2:34760712 1.80E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0055 K08472 - csv:101211868 991.49