Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0063 ATGGCCTACCGACCCAACCATTCCCCTAACGCTTTTTTCAATCATTATTCTCCCCAGGCCTCCGCCATGAAAATAAAGCAGAGAAAAGCTCCACAAATTCCCCTTCTTCCAATCAAAAAACAGAAAAGGATGCTGAACCAACCTGGACAATGGGTGGTGCTGGTGGCGGCAATATGGATTCAGGCATTTGCAGGCACAAATTTTGATTTCCCCTCTTATTCTTCCGATCTGAAGGCGGCTCTGGGGATGTCGCAGGTGGAGCTCAACTATCTGGCGGTGGCTTCCGACCTTGGCAAGGCCTTCGGGTGGTGCTCTGGCGTCGCTCTCTTATATTTTCCTTTGTGGGTGGTGATGTTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTCCAATGGCTTCTCCTTCAAAGGATTGTCTATCTGCCTTACTCTATGGTTTATCTTCTCTGCTTGATGGCTGGATGTAGTATTTGCTGGTTCAACACGGTCTGCTATGTCTCATGTATCCAAAATTTTCCAGCCAACCGTGCCCTTGCATTGTCCTTGATTGTCAGCTTTAATGGCGTCAGTGCAGCTCTATACACCCTAATTGCCAATGCAGTAGACCCCAATGATGCCGGTTTGTACCTCTTCCTAAATGCACTGGTTCCTCTCATCATCTCTATCGTTGCCCTCCTCCCAATCCTTCATCAGCCATCAGTTCAACCATCCTCTGCTGATGCCATCCGCCATGACTCTCTCATCTTCATATGCTTATACATCACGGCCGTTATCACAGGGGTGTACTTAATCACCTTCAATTCCAAGCCTTCCTACAAATACAGGTCCCAAATTCTGTTAGCAGGGGCTCTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAATTCTTAGTACACGCAGGTGGTTGGCTCGGATCATATCCACCAGCTTGAGCCGTCTTATTCACTCTAGATTTAACCTTGTTGATCATGAGCTTCACCAGGAGCTCATTGCTGTTGGAACAGAACGAAATGGTATGAAGGTCATCATCCCTTTTGATTCTAAAGAGAAGGAAAGCACTTCGAGGAAGGTGATGGAGAAAGAGAACTTGGTAATGCTTGAAGAAGAGCATTCGGCTAAGATGCTGTTGCGACGGTTGGACTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGTACGATTGGGTTGGTTTACAGCAACAATCTTGGACAAATTGCACAGTCGCTTGGATATAGTTCGTCAACAAGTTCACTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCAGCCCCAGATTTCATGCGTGAAAAGGTGCGTTTCGCCAGAACAGGGTGGCTAGCCATTGCACTGGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCAAAATCGCATTACAAGCTGGCACTGGCTTGATCGGCCTAAGCTCGGGATTCATATTTTCAGCCTCAGTCTCAATCACATCAGAGTTATTCGGACCGAACAGTTCAGGGGTCAACCACAACATCCTCATAACTAACATCCCTCTTGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTGGCGTACGATTCAAACGCCGAAAGTTCACACCAGATGGCGGCGCTGGGGGACGCGGTAGTGTGCATCGGCCAGAATTGCTATCTGCAGACGTTCGTATGGTGGGCTTGCATCTCCATCTTCGGCCTGGCTTCTAGCTTCTTGCTTTTCCGACGGACGAGACCGGCTTACGACCGCCATTACGAGAGTAACCTAAGCAAGATGCAGCCATTTTAG 1806 48.45 MAYRPNHSPNAFFNHYSPQASAMKIKQRKAPQIPLLPIKKQKRMLNQPGQWVVLVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVELNYLAVASDLGKAFGWCSGVALLYFPLWVVMFMAASMGFLGYGLQWLLLQRIVYLPYSMVYLLCLMAGCSICWFNTVCYVSCIQNFPANRALALSLIVSFNGVSAALYTLIANAVDPNDAGLYLFLNALVPLIISIVALLPILHQPSVQPSSADAIRHDSLIFICLYITAVITGVYLITFNSKPSYKYRSQILLAGALALLLVPLCLPGILSTRRWLARIISTSLSRLIHSRFNLVDHELHQELIAVGTERNGMKVIIPFDSKEKESTSRKVMEKENLVMLEEEHSAKMLLRRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGYSSSTSSLVTLYSSCSFFGRLISAAPDFMREKVRFARTGWLAIALVPTPIAFILLAASGSKIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVAYDSNAESSHQMAALGDAVVCIGQNCYLQTFVWWACISIFGLASSFLLFRRTRPAYDRHYESNLSKMQPF 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 795472 798382 + ClG42_06g0006300.10 Clacu06g0063 250711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0063 601 Pfam Nodulin-like 50 295 IPR010658 -
Clacu06g0063 601 Gene3D MFS general substrate transporter like domains 255 574 IPR036259 -
Clacu06g0063 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 50 589 - GO:0016020(PANTHER)
Clacu06g0063 601 SUPERFAMILY MFS general substrate transporter 256 586 IPR036259 -
Clacu06g0063 601 SUPERFAMILY MFS general substrate transporter 17 230 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0023 Clacu-Chr3:442824 Clacu06g0063 Clacu-Chr6:795472 1.20E-72 dispersed
Clacu06g0063 Clacu-Chr6:795472 Clacu07g1125 Clacu-Chr7:25898937 3.90E-173 dispersed
Clacu06g0063 Clacu-Chr6:795472 Clacu02g1212 Clacu-Chr2:24605836 1.10E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0063 - - - 0.0